Functional clusters

Information

  • Type InterPro
  • Description Phenylacetic acid degradation-related domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_25048_HRSCAF_25167 5 CH_ama_228 2 2 0.000862218
Amaranthus hybridus AmaHy_arrow1_Scaffold_7 5 CH_amhyb_300 2 2 0.000252525
Beta vulgaris Chr3_EL10_PGA_scaffold7 5 CH_bvu_465 2 2 0.00049675
Camellia sinensis var. sinensis Chr12 5 CH_camsi_418 4 25 0.0000000182805
Cannabis sativa NC_044375.1 5 CH_cansat_574 2 2 0.000656642
Cicer arietinum L. Ca_LG5_v3 5 CH_car_267 2 3 0.000233481
Coffea canephora chr4 5 CH_ccan_677 2 9 0.000638821
Carpinus fangiana Cfa06 5 CH_cfa_471 2 2 0.000227204
Citrullus lanatus CG_Chr05 5 CH_cla_87 3 3 0.0000000472204
Chenopodium quinoa C_Quinoa_Scaffold_4480 5 CH_cqu_1053 2 2 0.000995025
Cucumis sativus L. chr3 5 CH_csa_390 2 2 0.000250428
Durio zibethinus NW_019167960.1 5 CH_dzi_530 2 2 0.000463489
Erigeron canadensis Conyza_canadensis_scaffold:8 5 CH_eca_226 3 3 0.0000000302034
Eutrema salsugineum scaffold_7 5 CH_esa_504 2 2 0.000761499
Helianthus annuus HanXRQChr14 5 CH_han_386 3 3 0.0000000223995
Lactuca sativa Lsat_1_v8_lg_7 5 CH_lsa_384 3 4 0.000000317025
Nelumbo nucifera chr5 5 CH_nnu_492 2 2 0.00028901
Pisum sativum chr1LG6 5 CH_psa_608 2 2 0.000312981
Populus trichocarpa Chr04 5 CH_ptr_669 2 2 0.000346801
Quercus lobata 6 5 CH_qlo_1688 2 2 0.000516289
Simmondsia chinensis GWHAASQ00000025 5 CH_sci_442 2 2 0.000510856
Sechium edule LG12 5 CH_sed_439 2 2 0.000428052
Solanum lycopersicum SL4.0ch03 5 CH_sly_381 3 6 0.0000010333
Schrenkiella parvula ch1-2 5 CH_spa_318 2 2 0.000472404
Theobroma cacao Chromosome_1 5 CH_tca_722 2 3 0.000659107
Vitis vinifera chr7 5 CH_vvi_678 2 2 0.000456378
Avicennia marina ScioBoG_25048_HRSCAF_25167 6 CH_ama_228 2 2 0.000862218
Amaranthus hybridus AmaHy_arrow1_Scaffold_7 6 CH_amhyb_300 2 2 0.000252525
Beta vulgaris Chr3_EL10_PGA_scaffold7 6 CH_bvu_465 2 2 0.00049675
Camellia sinensis var. sinensis Chr12 6 CH_camsi_418 4 25 0.0000000182805
Cannabis sativa NC_044375.1 6 CH_cansat_574 2 2 0.000656642
Cicer arietinum L. Ca_LG5_v3 6 CH_car_267 2 3 0.000233481
Coffea canephora chr4 6 CH_ccan_677 2 9 0.000638821
Carpinus fangiana Cfa06 6 CH_cfa_471 2 2 0.000227204
Citrullus lanatus CG_Chr05 6 CH_cla_87 3 3 0.0000000472204
Cucumis melo chr06 6 CH_cme_353 2 2 0.000200133
Chenopodium quinoa C_Quinoa_Scaffold_4480 6 CH_cqu_1053 2 2 0.000995025
Cucumis sativus L. chr3 6 CH_csa_390 2 2 0.000250428
Durio zibethinus NW_019167960.1 6 CH_dzi_530 2 2 0.000463489
Erigeron canadensis Conyza_canadensis_scaffold:8 6 CH_eca_226 3 3 0.0000000302034
Eutrema salsugineum scaffold_7 6 CH_esa_504 2 2 0.000761499
Helianthus annuus HanXRQChr14 6 CH_han_386 3 3 0.0000000223995
Lactuca sativa Lsat_1_v8_lg_7 6 CH_lsa_384 3 4 0.000000317025
Nelumbo nucifera chr5 6 CH_nnu_492 2 2 0.00028901
Pisum sativum chr1LG6 6 CH_psa_608 2 2 0.000312981
Populus trichocarpa Chr04 6 CH_ptr_669 2 2 0.000346801
Quercus lobata 6 6 CH_qlo_1688 2 2 0.000516289
Simmondsia chinensis GWHAASQ00000025 6 CH_sci_442 2 2 0.000510856
Sechium edule LG12 6 CH_sed_439 2 2 0.000428052
Solanum lycopersicum SL4.0ch03 6 CH_sly_381 3 6 0.0000010333
Schrenkiella parvula ch1-2 6 CH_spa_318 2 2 0.000472404
Theobroma cacao Chromosome_1 6 CH_tca_722 2 3 0.000659107
Vitis vinifera chr7 6 CH_vvi_678 2 2 0.000456378

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001