Functional clusters

Information

  • Type InterPro
  • Description Oligosaccharyl transferase, STT3 subunit

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group25 5 CH_ach_595 2 2 0.000814819
Brassica oleracea C5 5 CH_bol_214 3 3 0.0000000320521
Carya illinoinensis Chr15 5 CH_cil_665 2 2 0.000185948
Carica papaya supercontig_40 5 CH_cpa_446 2 3 0.000285185
Helianthus annuus HanXRQChr08 5 CH_han_1063 2 2 0.000386429
Petunia axillaris Peaxi162Scf00047 5 CH_pax_694 2 2 0.000703556
Physcomitrium patens Chr12 5 CH_ppa_231 2 2 0.000183818
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_714 3 10 0.000001144
Sequoiadendron giganteum chr11 5 CH_sgi_2039 2 2 0.000146145
Sapria himalayana scaffold5_19632047 5 CH_shi_266 2 2 0.0000571804
Actinidia chinensis Lachesis_group25 6 CH_ach_595 2 2 0.000814819
Brassica oleracea C5 6 CH_bol_214 3 3 0.0000000320521
Carya illinoinensis Chr15 6 CH_cil_665 2 2 0.000185948
Carica papaya supercontig_40 6 CH_cpa_446 2 3 0.000285185
Helianthus annuus HanXRQChr08 6 CH_han_1063 2 2 0.000386429
Petunia axillaris Peaxi162Scf00047 6 CH_pax_694 2 2 0.000703556
Physcomitrium patens Chr12 6 CH_ppa_231 2 2 0.000183818
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_714 3 10 0.000001144
Sequoiadendron giganteum chr11 6 CH_sgi_2039 2 2 0.000146145
Sapria himalayana scaffold5_19632047 6 CH_shi_266 2 2 0.0000571804

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001