Functional clusters

Information

  • Type InterPro
  • Description Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB02 5 CH_bca_1267 4 33 0.0000622877
Brassica carinata ChrC01 5 CH_bca_440 4 6 0.0000000230034
Brassica carinata ChrB01 5 CH_bca_508 5 29 0.0000000599758
Brassica napus A05 5 CH_bna_1115 4 42 0.000156948
Brassica rapa A05 5 CH_bra_359 4 41 0.000072856
Corylus avellana 4 5 CH_cav_714 2 2 0.000460017
Helianthus annuus HanXRQChr17 5 CH_han_748 3 5 0.0000216942
Lonicera japonica GWHAAZE00000009 5 CH_lonja_452 3 3 0.000000188297
Manihot esculenta Chromosome14 5 CH_mes_216 4 5 0.00000000112692
Punica granatum NC_045134.1 5 CH_pgr_365 3 7 0.000016542
Quercus lobata 10 5 CH_qlo_1768 2 2 0.000774433
Brassica carinata ChrB02 6 CH_bca_1267 4 33 0.0000622877
Brassica carinata ChrC01 6 CH_bca_440 4 6 0.0000000230034
Brassica carinata ChrB01 6 CH_bca_508 5 29 0.0000000599758
Brassica napus A05 6 CH_bna_1115 4 42 0.000156948
Brassica rapa A05 6 CH_bra_359 4 41 0.000072856
Corylus avellana 4 6 CH_cav_714 2 2 0.000460017
Helianthus annuus HanXRQChr17 6 CH_han_748 3 5 0.0000216942
Lonicera japonica GWHAAZE00000009 6 CH_lonja_452 3 3 0.000000188297
Manihot esculenta Chromosome14 6 CH_mes_216 4 5 0.00000000112692
Punica granatum NC_045134.1 6 CH_pgr_365 3 7 0.000016542
Quercus lobata 10 6 CH_qlo_1768 2 2 0.000774433

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001