Functional clusters
Information
- Type InterPro
- Description ABA/WDS induced protein
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_117 | 5 | CH_aag_100 | 3 | 6 | 0.000000193219 |
| Actinidia chinensis | Lachesis_group27 | 5 | CH_ach_131 | 3 | 3 | 0.000000371811 |
| Actinidia chinensis | Lachesis_group7 | 5 | CH_ach_132 | 3 | 3 | 0.000000371811 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_5 | 5 | CH_amhyb_19 | 5 | 5 | 0.00000000000000225973 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.05 | 5 | CH_arhy_794 | 3 | 13 | 0.0000134501 |
| Beta vulgaris | Chr1_EL10_PGA_scaffold3 | 5 | CH_bvu_17 | 7 | 9 | 7.30747e-21 |
| Capsicum annuum | PGAv.1.6.scaffold264 | 5 | CH_can_136 | 4 | 4 | 0.00000000000169153 |
| Corylus avellana | 7 | 5 | CH_cav_115 | 4 | 6 | 0.0000000000202813 |
| Citrus clementina | scaffold_5 | 5 | CH_ccl_248 | 3 | 3 | 0.0000000100941 |
| Carpinus fangiana | Cfa07 | 5 | CH_cfa_404 | 2 | 2 | 0.0000757346 |
| Carya illinoinensis | Chr15 | 5 | CH_cil_664 | 2 | 2 | 0.000185948 |
| Citrullus lanatus | CG_Chr08 | 5 | CH_cla_209 | 2 | 2 | 0.0000887115 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3624 | 5 | CH_cqu_143 | 5 | 8 | 0.00000000000924141 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2081 | 5 | CH_cqu_207 | 4 | 4 | 0.000000000580855 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3472 | 5 | CH_cqu_232 | 4 | 5 | 0.00000000290354 |
| Cucumis sativus L. | chr6 | 5 | CH_csa_335 | 2 | 2 | 0.0000834759 |
| Eucalyptus grandis | Chr05 | 5 | CH_egr_46 | 11 | 13 | 5.22546e-34 |
| Erythranthe guttata | scaffold_3 | 5 | CH_egut_168 | 4 | 4 | 0.000000000145947 |
| Erythranthe guttata | scaffold_14 | 5 | CH_egut_396 | 4 | 34 | 0.00000673156 |
| Magnolia biondii | Chr09 | 5 | CH_mbi_233 | 4 | 10 | 0.000000000360768 |
| Malus domestica | Chr10 | 5 | CH_mdo_951 | 2 | 2 | 0.000113763 |
| Manihot esculenta | Chromosome02 | 5 | CH_mes_577 | 2 | 2 | 0.000183189 |
| Marchantia polymorpha | scaffold_98 | 5 | CH_mpo_188 | 2 | 2 | 0.000331327 |
| Olea europaea | chr14 | 5 | CH_oeu_404 | 2 | 3 | 0.000160132 |
| Oryza sativa ssp. japonica | chr01 | 5 | CH_osa_619 | 3 | 35 | 0.000273252 |
| Petunia axillaris | Peaxi162Scf00599 | 5 | CH_pax_194 | 3 | 4 | 0.000000118795 |
| Punica granatum | NC_045134.1 | 5 | CH_pgr_496 | 2 | 2 | 0.000225107 |
| Prunus persica | Pp08 | 5 | CH_ppe_684 | 2 | 2 | 0.000223789 |
| Populus trichocarpa | Chr05 | 5 | CH_ptr_277 | 3 | 4 | 0.0000000200451 |
| Quercus lobata | CM012294 | 5 | CH_qlo_692 | 3 | 3 | 0.0000000159937 |
| Rhododendron simsii | chr11 | 5 | CH_rsi_14 | 12 | 12 | 1.72286e-39 |
| Simmondsia chinensis | GWHAASQ00000020 | 5 | CH_sci_171 | 3 | 3 | 0.000000913446 |
| Simmondsia chinensis | GWHAASQ00000026 | 5 | CH_sci_76 | 4 | 5 | 0.00000000116645 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_598 | 4 | 5 | 0.0000000000260123 |
| Solanum lycopersicum | SL4.0ch04 | 5 | CH_sly_131 | 4 | 4 | 0.000000000000606655 |
| Solanum pennellii | Spenn-ch04 | 5 | CH_spe_49 | 5 | 6 | 1.7615e-16 |
| Solanum tuberosum | ST4.03ch04 | 5 | CH_stu_141 | 4 | 4 | 0.000000000000403753 |
| Selenicereus undatus | Scaffold_2055 | 5 | CH_sun_130 | 3 | 5 | 0.00000665043 |
| Selenicereus undatus | Scaffold_33675 | 5 | CH_sun_61 | 4 | 8 | 0.0000000101456 |
| Trochodendron aralioides | group11 | 5 | CH_tar_293 | 4 | 30 | 0.000000266347 |
| Trochodendron aralioides | group4 | 5 | CH_tar_949 | 2 | 2 | 0.000900549 |
| Tripterygium wilfordii | NC_052235.1 | 5 | CH_twi_123 | 3 | 3 | 0.00000000466234 |
| Vaccinium macrocarpon | chr9_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_127 | 4 | 4 | 0.00000000240989 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_37 | 8 | 23 | 2.76526e-17 |
| Zea mays | 3 | 5 | CH_zma_199 | 3 | 3 | 0.000000470605 |
| Anthoceros agrestis | Sc2ySwM_117 | 6 | CH_aag_100 | 3 | 6 | 0.000000193219 |
| Actinidia chinensis | Lachesis_group27 | 6 | CH_ach_131 | 3 | 3 | 0.000000371811 |
| Actinidia chinensis | Lachesis_group7 | 6 | CH_ach_132 | 3 | 3 | 0.000000371811 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_5 | 6 | CH_amhyb_19 | 5 | 5 | 0.00000000000000225973 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.05 | 6 | CH_arhy_794 | 3 | 13 | 0.0000134501 |
| Beta vulgaris | Chr1_EL10_PGA_scaffold3 | 6 | CH_bvu_17 | 7 | 9 | 7.30747e-21 |
| Capsicum annuum | PGAv.1.6.scaffold264 | 6 | CH_can_136 | 4 | 4 | 0.00000000000169153 |
| Corylus avellana | 7 | 6 | CH_cav_115 | 4 | 6 | 0.0000000000202813 |
| Citrus clementina | scaffold_5 | 6 | CH_ccl_248 | 3 | 3 | 0.0000000100941 |
| Carpinus fangiana | Cfa07 | 6 | CH_cfa_404 | 2 | 2 | 0.0000757346 |
| Carya illinoinensis | Chr15 | 6 | CH_cil_664 | 2 | 2 | 0.000185948 |
| Citrullus lanatus | CG_Chr08 | 6 | CH_cla_209 | 2 | 2 | 0.0000887115 |
| Cucumis melo | chr03 | 6 | CH_cme_138 | 3 | 4 | 0.0000000267023 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3624 | 6 | CH_cqu_143 | 5 | 8 | 0.00000000000924141 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2081 | 6 | CH_cqu_207 | 4 | 4 | 0.000000000580855 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3472 | 6 | CH_cqu_232 | 4 | 5 | 0.00000000290354 |
| Cucumis sativus L. | chr6 | 6 | CH_csa_335 | 2 | 2 | 0.0000834759 |
| Eucalyptus grandis | Chr05 | 6 | CH_egr_46 | 11 | 13 | 5.22546e-34 |
| Erythranthe guttata | scaffold_3 | 6 | CH_egut_168 | 4 | 4 | 0.000000000145947 |
| Erythranthe guttata | scaffold_14 | 6 | CH_egut_396 | 4 | 34 | 0.00000673156 |
| Magnolia biondii | Chr09 | 6 | CH_mbi_233 | 4 | 10 | 0.000000000360768 |
| Malus domestica | Chr10 | 6 | CH_mdo_951 | 2 | 2 | 0.000113763 |
| Manihot esculenta | Chromosome02 | 6 | CH_mes_577 | 2 | 2 | 0.000183189 |
| Marchantia polymorpha | scaffold_98 | 6 | CH_mpo_188 | 2 | 2 | 0.000331327 |
| Olea europaea | chr14 | 6 | CH_oeu_404 | 2 | 3 | 0.000160132 |
| Oryza sativa ssp. japonica | chr01 | 6 | CH_osa_619 | 3 | 35 | 0.000273252 |
| Petunia axillaris | Peaxi162Scf00599 | 6 | CH_pax_194 | 3 | 4 | 0.000000118795 |
| Punica granatum | NC_045134.1 | 6 | CH_pgr_496 | 2 | 2 | 0.000225107 |
| Prunus persica | Pp08 | 6 | CH_ppe_684 | 2 | 2 | 0.000223789 |
| Populus trichocarpa | Chr05 | 6 | CH_ptr_277 | 3 | 4 | 0.0000000200451 |
| Quercus lobata | CM012294 | 6 | CH_qlo_692 | 3 | 3 | 0.0000000159937 |
| Rhododendron simsii | chr11 | 6 | CH_rsi_14 | 12 | 12 | 1.72286e-39 |
| Simmondsia chinensis | GWHAASQ00000020 | 6 | CH_sci_171 | 3 | 3 | 0.000000913446 |
| Simmondsia chinensis | GWHAASQ00000026 | 6 | CH_sci_76 | 4 | 5 | 0.00000000116645 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_598 | 4 | 5 | 0.0000000000260123 |
| Solanum lycopersicum | SL4.0ch04 | 6 | CH_sly_131 | 4 | 4 | 0.000000000000606655 |
| Solanum pennellii | Spenn-ch04 | 6 | CH_spe_49 | 5 | 6 | 1.7615e-16 |
| Solanum tuberosum | ST4.03ch04 | 6 | CH_stu_141 | 4 | 4 | 0.000000000000403753 |
| Selenicereus undatus | Scaffold_2055 | 6 | CH_sun_130 | 3 | 5 | 0.00000665043 |
| Selenicereus undatus | Scaffold_33675 | 6 | CH_sun_61 | 4 | 8 | 0.0000000101456 |
| Trochodendron aralioides | group11 | 6 | CH_tar_293 | 4 | 30 | 0.000000266347 |
| Trochodendron aralioides | group4 | 6 | CH_tar_949 | 2 | 2 | 0.000900549 |
| Tripterygium wilfordii | NC_052235.1 | 6 | CH_twi_123 | 3 | 3 | 0.00000000466234 |
| Vaccinium macrocarpon | chr9_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_127 | 4 | 4 | 0.00000000240989 |
| Vaccinium macrocarpon | chr1_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_37 | 8 | 23 | 2.76526e-17 |
| Zea mays | 3 | 6 | CH_zma_199 | 3 | 3 | 0.000000470605 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |