Functional clusters

Information

  • Type InterPro
  • Description NAC domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group19 5 CH_ach_95 6 11 0.000000049518
Arabidopsis lyrata scaffold_1 5 CH_aly_121 6 6 0.000000000119817
Arabidopsis lyrata scaffold_2 5 CH_aly_333 6 19 0.00000311242
Aquilegia oxysepala CHR05 5 CH_aox_513 3 3 0.000600078
Aquilegia oxysepala CHR04 5 CH_aox_514 3 3 0.000600078
Arabidopsis thaliana Chr1 5 CH_ath_207 6 22 0.0000000801524
Arabidopsis thaliana Chr1 5 CH_ath_403 4 9 0.0000568726
Brassica carinata ChrB02 5 CH_bca_517 5 5 0.0000000767444
Brassica carinata ChrC05 5 CH_bca_52 10 13 1.66143e-17
Brassica carinata ChrB01 5 CH_bca_614 6 12 0.000000263863
Brassica carinata ChrC08 5 CH_bca_815 5 7 0.00000160142
Brassica carinata ChrC04 5 CH_bca_880 7 31 0.00000267579
Brassica carinata ChrC03 5 CH_bca_881 7 31 0.00000267579
Brassica napus A05 5 CH_bna_1278 4 6 0.000338428
Brassica napus C06 5 CH_bna_1287 5 16 0.000362627
Brassica napus A10 5 CH_bna_502 6 12 0.000000294235
Brassica napus C02 5 CH_bna_635 5 7 0.0000017937
Brassica napus A05 5 CH_bna_809 5 9 0.0000106944
Brassica napus C05 5 CH_bna_90 9 12 0.00000000000000375567
Brassica oleracea C5 5 CH_bol_154 6 8 0.00000000274404
Brassica oleracea C6 5 CH_bol_528 5 13 0.0000366555
Brassica rapa A10 5 CH_bra_39 8 10 0.000000000000208486
Beta vulgaris Chr6_EL10_PGA_scaffold0 5 CH_bvu_450 3 3 0.00038887
Beta vulgaris Chr7_EL10_PGA_scaffold5 5 CH_bvu_93 7 15 0.0000000000790135
Cannabis sativa NC_044371.1 5 CH_cansat_91 8 20 0.00000000000725591
Citrus clementina scaffold_4 5 CH_ccl_164 9 27 0.0000000000267671
Citrus clementina scaffold_1 5 CH_ccl_790 4 9 0.00083838
Carpinus fangiana Cfa02 5 CH_cfa_445 3 3 0.000139513
Carpinus fangiana Cfa04 5 CH_cfa_522 4 15 0.000312671
Cardamine hirsuta Chr8 5 CH_chi_206 5 5 0.000000016534
Cardamine hirsuta Chr1 5 CH_chi_370 4 4 0.00000473625
Cardamine hirsuta Chr2 5 CH_chi_430 4 5 0.0000236143
Carya illinoinensis Chr04 5 CH_cil_540 6 30 0.0000436312
Carya illinoinensis Chr05 5 CH_cil_770 4 8 0.000419912
Corchorus olitorius AWUE01018151.1 5 CH_col_118 3 3 0.000124033
Carica papaya supercontig_80 5 CH_cpa_43 7 11 0.0000000000148011
Capsella rubella scaffold_1 5 CH_cru_250 5 6 0.000000171994
Capsella rubella scaffold_2 5 CH_cru_559 4 7 0.00025249
Daucus carota DCARv2_Chr3 5 CH_dca_728 3 3 0.000844547
Davidia involucrata GWHABJS00000001 5 CH_din_624 3 3 0.000243218
Durio zibethinus NW_019168026.1 5 CH_dzi_147 6 8 0.00000000543063
Durio zibethinus NW_019167893.1 5 CH_dzi_303 5 9 0.0000060549
Erigeron canadensis Conyza_canadensis_scaffold:9 5 CH_eca_713 3 3 0.000391938
Eucalyptus grandis Chr09 5 CH_egr_256 12 35 0.00000000000000100502
Eucalyptus grandis Chr01 5 CH_egr_323 8 9 0.0000000000000389558
Eucalyptus grandis Chr01 5 CH_egr_684 5 5 0.0000000556871
Eucalyptus grandis Chr06 5 CH_egr_685 5 5 0.0000000556871
Eucalyptus grandis Chr07 5 CH_egr_80 17 32 7.56364e-28
Eucalyptus grandis Chr10 5 CH_egr_99 13 15 5.61567e-25
Erythranthe guttata scaffold_9 5 CH_egut_374 4 4 0.00000384786
Eutrema salsugineum scaffold_8 5 CH_esa_209 7 30 0.00000142439
Fragaria vesca Fvb7 5 CH_fve_167 9 32 0.000000000102245
Gossypium hirsutum D08 5 CH_ghi_1077 6 33 0.000280018
Gossypium hirsutum A08 5 CH_ghi_1088 6 34 0.000338887
Gossypium hirsutum A10 5 CH_ghi_734 4 4 0.0000181449
Gossypium raimondii Chr04 5 CH_gra_465 6 32 0.000133354
Helianthus annuus HanXRQChr13 5 CH_han_624 4 4 0.00000400434
Hydrangea macrophylla Hma1.2p1_1241F.1 5 CH_hma_193 4 5 0.00000207916
Lonicera japonica GWHAAZE00000009 5 CH_lonja_222 7 8 0.00000000000172454
Lonicera japonica GWHAAZE00000008 5 CH_lonja_244 8 16 0.00000000000919278
Lonicera japonica GWHAAZE00000006 5 CH_lonja_603 4 4 0.00000529361
Lonicera japonica GWHAAZE00000003 5 CH_lonja_960 4 7 0.000183719
Lactuca sativa Lsat_1_v8_lg_4 5 CH_lsa_847 3 3 0.000660458
Lactuca sativa Lsat_1_v8_lg_6 5 CH_lsa_848 3 3 0.000660458
Magnolia biondii Chr06 5 CH_mbi_819 5 24 0.0000843163
Malus domestica Chr01 5 CH_mdo_10 19 30 7.1481e-36
Malus domestica Chr03 5 CH_mdo_691 4 4 0.00000603531
Malus domestica Chr14 5 CH_mdo_692 4 4 0.00000603531
Malus domestica Chr07 5 CH_mdo_98 9 14 0.0000000000000039078
Manihot esculenta Chromosome07 5 CH_mes_143 10 27 0.00000000000119772
Manihot esculenta Chromosome01 5 CH_mes_225 6 7 0.00000000190502
Manihot esculenta Chromosome01 5 CH_mes_293 6 11 0.000000123831
Manihot esculenta Chromosome05 5 CH_mes_56 12 13 2.30213e-23
Manihot esculenta Chromosome08 5 CH_mes_597 4 6 0.000206113
Marchantia polymorpha scaffold_35 5 CH_mpo_161 3 9 0.00012887
Medicago truncatula chr7 5 CH_mtr_1255 3 3 0.000373345
Medicago truncatula chr8 5 CH_mtr_494 5 8 0.0000000288358
Nicotiana tabacum Nitab4.5_0000016 5 CH_nta_14 9 15 0.00000000000000254894
Olea europaea chr2 5 CH_oeu_118 5 5 0.0000000253927
Olea europaea chr11 5 CH_oeu_144 5 6 0.000000151895
Olea europaea scaffold203 5 CH_oeu_81 7 14 0.00000000109885
Oryza sativa ssp. japonica chr11 5 CH_osa_333 4 4 0.00000187804
Oryza sativa ssp. japonica chr10 5 CH_osa_737 3 3 0.00071836
Oryza sativa ssp. japonica chr11 5 CH_osa_738 3 3 0.00071836
Petunia axillaris Peaxi162Scf00245 5 CH_pax_350 4 5 0.0000188213
Punica granatum NC_045127.1 5 CH_pgr_216 5 6 0.000000107101
Punica granatum NC_045130.1 5 CH_pgr_23 14 37 6.4176e-21
Prunus persica Pp02 5 CH_ppe_27 15 20 3.64893e-28
Papaver somniferum NC_039362.1 5 CH_pso_129 8 12 0.00000000000000450725
Populus trichocarpa Chr14 5 CH_ptr_309 5 5 0.0000000624078
Populus trichocarpa Chr02 5 CH_ptr_556 4 5 0.0000703119
Populus trichocarpa Chr06 5 CH_ptr_717 4 7 0.00048868
Phaseolus vulgaris Chr10 5 CH_pvu_156 6 8 0.000000000956915
Quercus lobata 1 5 CH_qlo_1087 4 4 0.00000906203
Quercus lobata 8 5 CH_qlo_1088 4 4 0.00000906203
Quercus lobata 9 5 CH_qlo_111 13 18 1.10131e-23
Quercus lobata CM012294 5 CH_qlo_234 13 42 3.0239e-17
Quercus lobata 4 5 CH_qlo_342 8 10 0.0000000000000851709
Quercus lobata 3 5 CH_qlo_704 10 75 0.0000000176403
Rosa chinensis RcHm_v2.0_Chr1 5 CH_rch_1014 5 20 0.0000438464
Rosa chinensis RcHm_v2.0_Chr1 5 CH_rch_34 17 35 8.47361e-32
Rhododendron simsii chr02 5 CH_rsi_217 7 10 0.0000000000143829
Sequoiadendron giganteum chr7 5 CH_sgi_1094 4 4 0.000000127395
Sequoiadendron giganteum chr9 5 CH_sgi_1935 3 3 0.0000986786
Sequoiadendron giganteum HRSCAF_1 5 CH_sgi_410 6 6 0.000000000000200479
Sequoiadendron giganteum chr5 5 CH_sgi_411 6 6 0.000000000000200479
Solanum pennellii Spenn-ch02 5 CH_spe_321 6 23 0.000000379315
Solanum tuberosum ST4.03ch02 5 CH_stu_235 9 52 0.0000000011321
Solanum tuberosum ST4.03ch04 5 CH_stu_566 6 38 0.000046139
Trochodendron aralioides group5 5 CH_tar_65 8 10 0.0000000000000685217
Theobroma cacao Chromosome_1 5 CH_tca_262 5 5 0.0000000188943
Tripterygium wilfordii NC_052248.1 5 CH_twi_19 11 12 2.1733e-21
Tripterygium wilfordii NC_052249.1 5 CH_twi_92 6 6 0.000000000180471
Vigna mungo CM024078.1 5 CH_vmu_490 4 9 0.000269465
Vitis vinifera chr15 5 CH_vvi_155 6 7 0.0000000000524861
Vitis vinifera chr19 5 CH_vvi_235 5 6 0.0000000181964
Zea mays 10 5 CH_zma_21 10 11 5.44548e-19
Zea mays 10 5 CH_zma_233 5 8 0.00000264192
Zea mays 1 5 CH_zma_74 7 9 0.0000000000279819
Actinidia chinensis Lachesis_group19 6 CH_ach_95 6 11 0.000000049518
Arabidopsis lyrata scaffold_1 6 CH_aly_121 6 6 0.000000000119817
Arabidopsis lyrata scaffold_2 6 CH_aly_333 6 19 0.00000311242
Aquilegia oxysepala CHR05 6 CH_aox_513 3 3 0.000600078
Aquilegia oxysepala CHR04 6 CH_aox_514 3 3 0.000600078
Arabidopsis thaliana Chr1 6 CH_ath_207 6 22 0.0000000801524
Arabidopsis thaliana Chr1 6 CH_ath_403 4 9 0.0000568726
Brassica carinata ChrB02 6 CH_bca_517 5 5 0.0000000767444
Brassica carinata ChrC05 6 CH_bca_52 10 13 1.66143e-17
Brassica carinata ChrB01 6 CH_bca_614 6 12 0.000000263863
Brassica carinata ChrC08 6 CH_bca_815 5 7 0.00000160142
Brassica carinata ChrC04 6 CH_bca_880 7 31 0.00000267579
Brassica carinata ChrC03 6 CH_bca_881 7 31 0.00000267579
Brassica napus A05 6 CH_bna_1278 4 6 0.000338428
Brassica napus C06 6 CH_bna_1287 5 16 0.000362627
Brassica napus A10 6 CH_bna_502 6 12 0.000000294235
Brassica napus C02 6 CH_bna_635 5 7 0.0000017937
Brassica napus A05 6 CH_bna_809 5 9 0.0000106944
Brassica napus C05 6 CH_bna_90 9 12 0.00000000000000375567
Brassica oleracea C5 6 CH_bol_154 6 8 0.00000000274404
Brassica oleracea C6 6 CH_bol_528 5 13 0.0000366555
Brassica rapa A10 6 CH_bra_39 8 10 0.000000000000208486
Beta vulgaris Chr6_EL10_PGA_scaffold0 6 CH_bvu_450 3 3 0.00038887
Beta vulgaris Chr7_EL10_PGA_scaffold5 6 CH_bvu_93 7 15 0.0000000000790135
Cannabis sativa NC_044371.1 6 CH_cansat_91 8 20 0.00000000000725591
Citrus clementina scaffold_4 6 CH_ccl_164 9 27 0.0000000000267671
Citrus clementina scaffold_1 6 CH_ccl_790 4 9 0.00083838
Carpinus fangiana Cfa02 6 CH_cfa_445 3 3 0.000139513
Carpinus fangiana Cfa04 6 CH_cfa_522 4 15 0.000312671
Cardamine hirsuta Chr8 6 CH_chi_206 5 5 0.000000016534
Cardamine hirsuta Chr1 6 CH_chi_370 4 4 0.00000473625
Cardamine hirsuta Chr2 6 CH_chi_430 4 5 0.0000236143
Carya illinoinensis Chr04 6 CH_cil_540 6 30 0.0000436312
Carya illinoinensis Chr05 6 CH_cil_770 4 8 0.000419912
Corchorus olitorius AWUE01018151.1 6 CH_col_118 3 3 0.000124033
Carica papaya supercontig_80 6 CH_cpa_43 7 11 0.0000000000148011
Capsella rubella scaffold_1 6 CH_cru_250 5 6 0.000000171994
Capsella rubella scaffold_2 6 CH_cru_559 4 7 0.00025249
Daucus carota DCARv2_Chr3 6 CH_dca_728 3 3 0.000844547
Davidia involucrata GWHABJS00000001 6 CH_din_624 3 3 0.000243218
Durio zibethinus NW_019168026.1 6 CH_dzi_147 6 8 0.00000000543063
Durio zibethinus NW_019167893.1 6 CH_dzi_303 5 9 0.0000060549
Erigeron canadensis Conyza_canadensis_scaffold:9 6 CH_eca_713 3 3 0.000391938
Eucalyptus grandis Chr09 6 CH_egr_256 12 35 0.00000000000000100502
Eucalyptus grandis Chr01 6 CH_egr_323 8 9 0.0000000000000389558
Eucalyptus grandis Chr01 6 CH_egr_684 5 5 0.0000000556871
Eucalyptus grandis Chr06 6 CH_egr_685 5 5 0.0000000556871
Eucalyptus grandis Chr07 6 CH_egr_80 17 32 7.56364e-28
Eucalyptus grandis Chr10 6 CH_egr_99 13 15 5.61567e-25
Erythranthe guttata scaffold_9 6 CH_egut_374 4 4 0.00000384786
Eutrema salsugineum scaffold_8 6 CH_esa_209 7 30 0.00000142439
Fragaria x ananassa Fvb7-4 6 CH_fan_1098 7 62 0.000553216
Fragaria x ananassa Fvb7-2 6 CH_fan_258 8 28 0.0000000149693
Fragaria x ananassa Fvb7-2 6 CH_fan_409 7 25 0.000000611972
Fragaria x ananassa Fvb7-3 6 CH_fan_646 6 20 0.0000130987
Fragaria x ananassa Fvb7-1 6 CH_fan_933 7 55 0.000233675
Fragaria vesca Fvb7 6 CH_fve_167 9 32 0.000000000102245
Gossypium hirsutum D08 6 CH_ghi_1077 6 33 0.000280018
Gossypium hirsutum A08 6 CH_ghi_1088 6 34 0.000338887
Gossypium hirsutum A10 6 CH_ghi_734 4 4 0.0000181449
Gossypium raimondii Chr04 6 CH_gra_465 6 32 0.000133354
Helianthus annuus HanXRQChr13 6 CH_han_624 4 4 0.00000400434
Hydrangea macrophylla Hma1.2p1_1241F.1 6 CH_hma_193 4 5 0.00000207916
Lonicera japonica GWHAAZE00000009 6 CH_lonja_222 7 8 0.00000000000172454
Lonicera japonica GWHAAZE00000008 6 CH_lonja_244 8 16 0.00000000000919278
Lonicera japonica GWHAAZE00000006 6 CH_lonja_603 4 4 0.00000529361
Lonicera japonica GWHAAZE00000003 6 CH_lonja_960 4 7 0.000183719
Lactuca sativa Lsat_1_v8_lg_4 6 CH_lsa_847 3 3 0.000660458
Lactuca sativa Lsat_1_v8_lg_6 6 CH_lsa_848 3 3 0.000660458
Magnolia biondii Chr06 6 CH_mbi_819 5 24 0.0000843163
Malus domestica Chr01 6 CH_mdo_10 19 30 7.1481e-36
Malus domestica Chr03 6 CH_mdo_691 4 4 0.00000603531
Malus domestica Chr14 6 CH_mdo_692 4 4 0.00000603531
Malus domestica Chr07 6 CH_mdo_98 9 14 0.0000000000000039078
Manihot esculenta Chromosome07 6 CH_mes_143 10 27 0.00000000000119772
Manihot esculenta Chromosome01 6 CH_mes_225 6 7 0.00000000190502
Manihot esculenta Chromosome01 6 CH_mes_293 6 11 0.000000123831
Manihot esculenta Chromosome05 6 CH_mes_56 12 13 2.30213e-23
Manihot esculenta Chromosome08 6 CH_mes_597 4 6 0.000206113
Marchantia polymorpha scaffold_35 6 CH_mpo_161 3 9 0.00012887
Medicago truncatula chr7 6 CH_mtr_1255 3 3 0.000373345
Medicago truncatula chr8 6 CH_mtr_494 5 8 0.0000000288358
Nicotiana tabacum Nitab4.5_0000016 6 CH_nta_14 9 15 0.00000000000000254894
Olea europaea chr2 6 CH_oeu_118 5 5 0.0000000253927
Olea europaea chr11 6 CH_oeu_144 5 6 0.000000151895
Olea europaea scaffold203 6 CH_oeu_81 7 14 0.00000000109885
Oryza sativa ssp. japonica chr11 6 CH_osa_333 4 4 0.00000187804
Oryza sativa ssp. japonica chr10 6 CH_osa_737 3 3 0.00071836
Oryza sativa ssp. japonica chr11 6 CH_osa_738 3 3 0.00071836
Petunia axillaris Peaxi162Scf00245 6 CH_pax_350 4 5 0.0000188213
Punica granatum NC_045127.1 6 CH_pgr_216 5 6 0.000000107101
Punica granatum NC_045130.1 6 CH_pgr_23 14 37 6.4176e-21
Prunus persica Pp02 6 CH_ppe_27 15 20 3.64893e-28
Papaver somniferum NC_039362.1 6 CH_pso_129 8 12 0.00000000000000450725
Populus trichocarpa Chr14 6 CH_ptr_309 5 5 0.0000000624078
Populus trichocarpa Chr02 6 CH_ptr_556 4 5 0.0000703119
Populus trichocarpa Chr06 6 CH_ptr_717 4 7 0.00048868
Phaseolus vulgaris Chr10 6 CH_pvu_156 6 8 0.000000000956915
Quercus lobata 1 6 CH_qlo_1087 4 4 0.00000906203
Quercus lobata 8 6 CH_qlo_1088 4 4 0.00000906203
Quercus lobata 9 6 CH_qlo_111 13 18 1.10131e-23
Quercus lobata CM012294 6 CH_qlo_234 13 42 3.0239e-17
Quercus lobata 4 6 CH_qlo_342 8 10 0.0000000000000851709
Quercus lobata 3 6 CH_qlo_704 10 75 0.0000000176403
Rosa chinensis RcHm_v2.0_Chr1 6 CH_rch_1014 5 20 0.0000438464
Rosa chinensis RcHm_v2.0_Chr1 6 CH_rch_34 17 35 8.47361e-32
Rhododendron simsii chr02 6 CH_rsi_217 7 10 0.0000000000143829
Sequoiadendron giganteum chr7 6 CH_sgi_1094 4 4 0.000000127395
Sequoiadendron giganteum chr9 6 CH_sgi_1935 3 3 0.0000986786
Sequoiadendron giganteum HRSCAF_1 6 CH_sgi_410 6 6 0.000000000000200479
Sequoiadendron giganteum chr5 6 CH_sgi_411 6 6 0.000000000000200479
Solanum pennellii Spenn-ch02 6 CH_spe_321 6 23 0.000000379315
Solanum tuberosum ST4.03ch02 6 CH_stu_235 9 52 0.0000000011321
Solanum tuberosum ST4.03ch04 6 CH_stu_566 6 38 0.000046139
Trochodendron aralioides group5 6 CH_tar_65 8 10 0.0000000000000685217
Theobroma cacao Chromosome_1 6 CH_tca_262 5 5 0.0000000188943
Tripterygium wilfordii NC_052248.1 6 CH_twi_19 11 12 2.1733e-21
Tripterygium wilfordii NC_052249.1 6 CH_twi_92 6 6 0.000000000180471
Vigna mungo CM024078.1 6 CH_vmu_490 4 9 0.000269465
Vitis vinifera chr15 6 CH_vvi_155 6 7 0.0000000000524861
Vitis vinifera chr19 6 CH_vvi_235 5 6 0.0000000181964
Zea mays 10 6 CH_zma_21 10 11 5.44548e-19
Zea mays 10 6 CH_zma_233 5 8 0.00000264192
Zea mays 1 6 CH_zma_74 7 9 0.0000000000279819

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001