Functional clusters

Information

  • Type InterPro
  • Description RecF/RecN/SMC, N-terminal

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 5 CH_arhy_781 3 6 0.0000122292
Amborella trichopoda AmTr_v1.0_scaffold00029 5 CH_atr_528 3 16 0.000296146
Coffea canephora chr1 5 CH_ccan_697 2 6 0.000715481
Davidia involucrata GWHABJS00000009 5 CH_din_429 3 8 0.0000251935
Fragaria vesca Fvb7 5 CH_fve_324 5 45 0.000000140779
Lonicera japonica GWHAAZE00000002 5 CH_lonja_66 12 61 2.66672e-25
Sequoiadendron giganteum chr5 5 CH_sgi_1348 3 4 0.00000234909
Solanum pennellii Spenn-ch06 5 CH_spe_902 2 2 0.00093406
Utricularia gibba unitig_27 5 CH_ugi_367 2 2 0.000820479
Vigna mungo CM024072.1 5 CH_vmu_630 2 2 0.000969211
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 6 CH_arhy_781 3 6 0.0000122292
Amborella trichopoda AmTr_v1.0_scaffold00029 6 CH_atr_528 3 16 0.000296146
Coffea canephora chr1 6 CH_ccan_697 2 6 0.000715481
Davidia involucrata GWHABJS00000009 6 CH_din_429 3 8 0.0000251935
Fragaria x ananassa Fvb7-2 6 CH_fan_270 6 66 0.0000000228559
Fragaria vesca Fvb7 6 CH_fve_324 5 45 0.000000140779
Lonicera japonica GWHAAZE00000002 6 CH_lonja_66 12 61 2.66672e-25
Sequoiadendron giganteum chr5 6 CH_sgi_1348 3 4 0.00000234909
Solanum pennellii Spenn-ch06 6 CH_spe_902 2 2 0.00093406
Utricularia gibba unitig_27 6 CH_ugi_367 2 2 0.000820479
Vigna mungo CM024072.1 6 CH_vmu_630 2 2 0.000969211

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001