Functional clusters

Information

  • Type InterPro
  • Description Phytocyanin domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_362 5 CH_aag_235 3 3 0.00011924
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.11 5 CH_arhy_1079 3 3 0.000282251
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.19 5 CH_arhy_734 4 6 0.00000670097
Amborella trichopoda AmTr_v1.0_scaffold00004 5 CH_atr_233 4 5 0.000000348445
Brassica carinata ChrC07 5 CH_bca_337 5 5 0.00000000253498
Brassica napus A09 5 CH_bna_1049 4 8 0.0000881162
Brassica napus C08 5 CH_bna_1451 3 3 0.000689059
Brassica oleracea C8 5 CH_bol_720 3 3 0.000300424
Cannabis sativa NC_044370.1 5 CH_cansat_270 5 16 0.00000172243
Capsicum annuum PGAv.1.6.scaffold407 5 CH_can_525 3 3 0.0000670022
Capsicum annuum PGAv.1.6.scaffold206 5 CH_can_526 3 3 0.0000670022
Cicer arietinum L. Ca_LG3_v3 5 CH_car_82 4 5 0.000000222346
Corylus avellana 7 5 CH_cav_171 5 6 0.00000000296141
Carya illinoinensis Chr05 5 CH_cil_397 4 4 0.000000822072
Citrullus lanatus CG_Chr11 5 CH_cla_244 3 3 0.000125842
Carica papaya supercontig_46 5 CH_cpa_420 3 4 0.0000959646
Cucumis sativus L. chr5 5 CH_csa_372 3 3 0.000180791
Cucumis sativus L. chr1 5 CH_csa_373 3 3 0.000180791
Cucumis sativus L. chr2 5 CH_csa_374 3 3 0.000180791
Cucumis sativus L. chr7 5 CH_csa_80 6 6 0.00000000000111961
Davidia involucrata GWHABJS00000001 5 CH_din_69 7 7 0.00000000000000221848
Erigeron canadensis Conyza_canadensis_scaffold:5 5 CH_eca_140 5 6 0.000000000312179
Erigeron canadensis Conyza_canadensis_scaffold:2 5 CH_eca_662 3 4 0.000208796
Eucalyptus grandis Chr03 5 CH_egr_220 12 74 5.78179e-17
Eutrema salsugineum scaffold_15 5 CH_esa_268 4 6 0.0000110462
Fragaria vesca Fvb6 5 CH_fve_689 3 3 0.000337458
Glycine max Gm07 5 CH_gma_698 3 3 0.000213441
Helianthus annuus HanXRQChr09 5 CH_han_1101 3 3 0.000483426
Helianthus annuus HanXRQChr12 5 CH_han_1102 3 3 0.000483426
Helianthus annuus HanXRQChr03 5 CH_han_231 6 7 0.0000000000290231
Helianthus annuus HanXRQChr17 5 CH_han_477 5 9 0.000000256175
Helianthus annuus HanXRQChr09 5 CH_han_540 4 4 0.00000099947
Helianthus annuus HanXRQChr06 5 CH_han_717 4 6 0.0000149424
Lupinus albus Lalb_Chr23 5 CH_lal_458 4 10 0.0000982587
Magnolia biondii Chr01 5 CH_mbi_1236 3 6 0.000810555
Magnolia biondii Chr05 5 CH_mbi_212 7 34 0.00000000014695
Marchantia polymorpha scaffold_98 5 CH_mpo_168 3 3 0.000167219
Nicotiana tabacum Nitab4.5_0000028 5 CH_nta_184 3 3 0.0000811847
Oryza sativa ssp. japonica chr08 5 CH_osa_110 6 7 0.00000000000234597
Prunus persica Pp08 5 CH_ppe_789 3 3 0.000477085
Papaver somniferum NC_039365.1 5 CH_pso_1050 3 3 0.000241925
Populus trichocarpa Chr18 5 CH_ptr_206 5 5 0.00000000080858
Populus trichocarpa Chr06 5 CH_ptr_646 3 3 0.000240072
Rosa chinensis RcHm_v2.0_Chr6 5 CH_rch_831 4 7 0.0000068216
Striga asiatica scaffold1 5 CH_sas_71 4 6 0.00000135563
Salvia bowleyana GWHASIU00000002 5 CH_sbo_621 3 5 0.000221449
Sequoiadendron giganteum chr9 5 CH_sgi_5 22 23 4.14954e-58
Solanum lycopersicum SL4.0ch07 5 CH_sly_311 4 4 0.000000128536
Solanum lycopersicum SL4.0ch01 5 CH_sly_652 3 3 0.0000952086
Trifolium pratense Tp57577_TGAC_v2_scaf_366 5 CH_tpr_131 5 6 0.00000000160294
Trifolium pratense Tp57577_TGAC_v2_LG2 5 CH_tpr_534 3 3 0.000113838
Tripterygium wilfordii NC_052253.1 5 CH_twi_198 4 4 0.000000374692
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_525 3 3 0.000118376
Vanilla planifolia CM028153.1 5 CH_vpl_108 4 4 0.0000000287457
Anthoceros agrestis Sc2ySwM_362 6 CH_aag_235 3 3 0.00011924
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.11 6 CH_arhy_1079 3 3 0.000282251
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.19 6 CH_arhy_734 4 6 0.00000670097
Amborella trichopoda AmTr_v1.0_scaffold00004 6 CH_atr_233 4 5 0.000000348445
Brassica carinata ChrC07 6 CH_bca_337 5 5 0.00000000253498
Brassica napus A09 6 CH_bna_1049 4 8 0.0000881162
Brassica napus C08 6 CH_bna_1451 3 3 0.000689059
Brassica oleracea C8 6 CH_bol_720 3 3 0.000300424
Cannabis sativa NC_044370.1 6 CH_cansat_270 5 16 0.00000172243
Capsicum annuum PGAv.1.6.scaffold407 6 CH_can_525 3 3 0.0000670022
Capsicum annuum PGAv.1.6.scaffold206 6 CH_can_526 3 3 0.0000670022
Cicer arietinum L. Ca_LG3_v3 6 CH_car_82 4 5 0.000000222346
Corylus avellana 7 6 CH_cav_171 5 6 0.00000000296141
Carya illinoinensis Chr05 6 CH_cil_397 4 4 0.000000822072
Citrullus lanatus CG_Chr11 6 CH_cla_244 3 3 0.000125842
Cucumis melo chr02 6 CH_cme_193 4 5 0.000000725953
Cucumis melo chr09 6 CH_cme_321 3 3 0.000101338
Carica papaya supercontig_46 6 CH_cpa_420 3 4 0.0000959646
Cucumis sativus L. chr5 6 CH_csa_372 3 3 0.000180791
Cucumis sativus L. chr1 6 CH_csa_373 3 3 0.000180791
Cucumis sativus L. chr2 6 CH_csa_374 3 3 0.000180791
Cucumis sativus L. chr7 6 CH_csa_80 6 6 0.00000000000111961
Davidia involucrata GWHABJS00000001 6 CH_din_69 7 7 0.00000000000000221848
Erigeron canadensis Conyza_canadensis_scaffold:5 6 CH_eca_140 5 6 0.000000000312179
Erigeron canadensis Conyza_canadensis_scaffold:2 6 CH_eca_662 3 4 0.000208796
Eucalyptus grandis Chr03 6 CH_egr_220 12 74 5.78179e-17
Eutrema salsugineum scaffold_15 6 CH_esa_268 4 6 0.0000110462
Fragaria x ananassa Fvb1-2 6 CH_fan_159 6 7 0.0000000000807875
Fragaria x ananassa Fvb7-2 6 CH_fan_59 8 9 4.765e-16
Fragaria vesca Fvb6 6 CH_fve_689 3 3 0.000337458
Glycine max Gm07 6 CH_gma_698 3 3 0.000213441
Helianthus annuus HanXRQChr09 6 CH_han_1101 3 3 0.000483426
Helianthus annuus HanXRQChr12 6 CH_han_1102 3 3 0.000483426
Helianthus annuus HanXRQChr03 6 CH_han_231 6 7 0.0000000000290231
Helianthus annuus HanXRQChr17 6 CH_han_477 5 9 0.000000256175
Helianthus annuus HanXRQChr09 6 CH_han_540 4 4 0.00000099947
Helianthus annuus HanXRQChr06 6 CH_han_717 4 6 0.0000149424
Lupinus albus Lalb_Chr23 6 CH_lal_458 4 10 0.0000982587
Magnolia biondii Chr01 6 CH_mbi_1236 3 6 0.000810555
Magnolia biondii Chr05 6 CH_mbi_212 7 34 0.00000000014695
Marchantia polymorpha scaffold_98 6 CH_mpo_168 3 3 0.000167219
Nicotiana tabacum Nitab4.5_0000028 6 CH_nta_184 3 3 0.0000811847
Oryza sativa ssp. japonica chr08 6 CH_osa_110 6 7 0.00000000000234597
Prunus persica Pp08 6 CH_ppe_789 3 3 0.000477085
Papaver somniferum NC_039365.1 6 CH_pso_1050 3 3 0.000241925
Populus trichocarpa Chr18 6 CH_ptr_206 5 5 0.00000000080858
Populus trichocarpa Chr06 6 CH_ptr_646 3 3 0.000240072
Rosa chinensis RcHm_v2.0_Chr6 6 CH_rch_831 4 7 0.0000068216
Striga asiatica scaffold1 6 CH_sas_71 4 6 0.00000135563
Salvia bowleyana GWHASIU00000002 6 CH_sbo_621 3 5 0.000221449
Sequoiadendron giganteum chr9 6 CH_sgi_5 22 23 4.14954e-58
Solanum lycopersicum SL4.0ch07 6 CH_sly_311 4 4 0.000000128536
Solanum lycopersicum SL4.0ch01 6 CH_sly_652 3 3 0.0000952086
Trifolium pratense Tp57577_TGAC_v2_scaf_366 6 CH_tpr_131 5 6 0.00000000160294
Trifolium pratense Tp57577_TGAC_v2_LG2 6 CH_tpr_534 3 3 0.000113838
Tripterygium wilfordii NC_052253.1 6 CH_twi_198 4 4 0.000000374692
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_525 3 3 0.000118376
Vanilla planifolia CM028153.1 6 CH_vpl_108 4 4 0.0000000287457

Available child term results

Ontology identifier Description Number of clusters
IPR041846 Early nodulin-like protein domain 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001