Functional clusters
Information
- Type InterPro
- Description Potassium channel tetramerisation-type BTB domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | ChrC01 | 5 | CH_bca_2096 | 2 | 3 | 0.000961902 |
| Camellia sinensis var. sinensis | Chr2 | 5 | CH_camsi_170 | 7 | 50 | 0.000000000000250348 |
| Cannabis sativa | NC_044376.1 | 5 | CH_cansat_513 | 2 | 2 | 0.000393985 |
| Physcomitrium patens | Chr22 | 5 | CH_ppa_107 | 3 | 5 | 0.0000123838 |
| Papaver somniferum | NC_039361.1 | 5 | CH_pso_187 | 5 | 6 | 0.000000000000762503 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 5 | CH_rch_555 | 3 | 3 | 0.0000000834367 |
| Rhododendron simsii | chr01 | 5 | CH_rsi_165 | 5 | 7 | 0.00000000000015294 |
| Solanum pennellii | Spenn-ch12 | 5 | CH_spe_309 | 3 | 3 | 0.000000249282 |
| Solanum tuberosum | ST4.03ch12 | 5 | CH_stu_60 | 6 | 6 | 1.67025e-18 |
| Brassica carinata | ChrC01 | 6 | CH_bca_2096 | 2 | 3 | 0.000961902 |
| Camellia sinensis var. sinensis | Chr2 | 6 | CH_camsi_170 | 7 | 50 | 0.000000000000250348 |
| Cannabis sativa | NC_044376.1 | 6 | CH_cansat_513 | 2 | 2 | 0.000393985 |
| Physcomitrium patens | Chr22 | 6 | CH_ppa_107 | 3 | 5 | 0.0000123838 |
| Papaver somniferum | NC_039361.1 | 6 | CH_pso_187 | 5 | 6 | 0.000000000000762503 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 6 | CH_rch_555 | 3 | 3 | 0.0000000834367 |
| Rhododendron simsii | chr01 | 6 | CH_rsi_165 | 5 | 7 | 0.00000000000015294 |
| Solanum pennellii | Spenn-ch12 | 6 | CH_spe_309 | 3 | 3 | 0.000000249282 |
| Solanum tuberosum | ST4.03ch12 | 6 | CH_stu_60 | 6 | 6 | 1.67025e-18 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |