Functional clusters

Information

  • Type InterPro
  • Description Prephenate dehydrogenase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_9 5 CH_amhyb_216 2 2 0.0000841751
Aquilegia oxysepala CHR05 5 CH_aox_481 2 2 0.000481193
Beta vulgaris Chr8_EL10_PGA_scaffold4 5 CH_bvu_343 2 2 0.0000827917
Corylus avellana 11 5 CH_cav_631 2 2 0.000230008
Chenopodium quinoa C_Quinoa_Scaffold_3799 5 CH_cqu_832 2 2 0.000284293
Chenopodium quinoa C_Quinoa_Scaffold_1611 5 CH_cqu_833 2 2 0.000284293
Oryza sativa ssp. japonica chr06 5 CH_osa_692 2 3 0.000475289
Pisum sativum chr4LG4 5 CH_psa_616 2 2 0.000312981
Amaranthus hybridus AmaHy_arrow1_Scaffold_9 6 CH_amhyb_216 2 2 0.0000841751
Aquilegia oxysepala CHR05 6 CH_aox_481 2 2 0.000481193
Beta vulgaris Chr8_EL10_PGA_scaffold4 6 CH_bvu_343 2 2 0.0000827917
Corylus avellana 11 6 CH_cav_631 2 2 0.000230008
Chenopodium quinoa C_Quinoa_Scaffold_3799 6 CH_cqu_832 2 2 0.000284293
Chenopodium quinoa C_Quinoa_Scaffold_1611 6 CH_cqu_833 2 2 0.000284293
Oryza sativa ssp. japonica chr06 6 CH_osa_692 2 3 0.000475289
Pisum sativum chr4LG4 6 CH_psa_616 2 2 0.000312981

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001