Functional clusters
Information
- Type InterPro
- Description Bicarbonate transporter, eukaryotic
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group24 | 5 | CH_ach_594 | 2 | 2 | 0.000814819 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.18 | 5 | CH_arhy_669 | 3 | 3 | 0.00000238107 |
| Brassica napus | C04 | 5 | CH_bna_588 | 3 | 3 | 0.00000104602 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 5 | CH_bvu_164 | 4 | 15 | 0.0000000812202 |
| Fragaria vesca | Fvb4 | 5 | CH_fve_798 | 3 | 28 | 0.000595137 |
| Lonicera japonica | GWHAAZE00000007 | 5 | CH_lonja_1150 | 2 | 2 | 0.000598874 |
| Oryza sativa ssp. japonica | chr01 | 5 | CH_osa_779 | 2 | 4 | 0.000950562 |
| Punica granatum | NC_045127.1 | 5 | CH_pgr_145 | 4 | 5 | 0.000000000798421 |
| Quercus lobata | 5 | 5 | CH_qlo_317 | 5 | 5 | 0.000000000000024623 |
| Sequoiadendron giganteum | chr5 | 5 | CH_sgi_470 | 5 | 6 | 0.000000000000761006 |
| Sequoiadendron giganteum | chr5 | 5 | CH_sgi_699 | 4 | 4 | 0.000000000473454 |
| Utricularia gibba | unitig_60 | 5 | CH_ugi_316 | 2 | 2 | 0.000492287 |
| Actinidia chinensis | Lachesis_group24 | 6 | CH_ach_594 | 2 | 2 | 0.000814819 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.18 | 6 | CH_arhy_669 | 3 | 3 | 0.00000238107 |
| Brassica napus | C04 | 6 | CH_bna_588 | 3 | 3 | 0.00000104602 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 6 | CH_bvu_164 | 4 | 15 | 0.0000000812202 |
| Fragaria vesca | Fvb4 | 6 | CH_fve_798 | 3 | 28 | 0.000595137 |
| Lonicera japonica | GWHAAZE00000007 | 6 | CH_lonja_1150 | 2 | 2 | 0.000598874 |
| Oryza sativa ssp. japonica | chr01 | 6 | CH_osa_779 | 2 | 4 | 0.000950562 |
| Punica granatum | NC_045127.1 | 6 | CH_pgr_145 | 4 | 5 | 0.000000000798421 |
| Quercus lobata | 5 | 6 | CH_qlo_317 | 5 | 5 | 0.000000000000024623 |
| Sequoiadendron giganteum | chr5 | 6 | CH_sgi_470 | 5 | 6 | 0.000000000000761006 |
| Sequoiadendron giganteum | chr5 | 6 | CH_sgi_699 | 4 | 4 | 0.000000000473454 |
| Utricularia gibba | unitig_60 | 6 | CH_ugi_316 | 2 | 2 | 0.000492287 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |