Functional clusters
Information
- Type InterPro
- Description Amine oxidase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr2 | 5 | CH_acertr_1020 | 3 | 9 | 0.000711818 |
| Beta vulgaris | Chr7_EL10_PGA_scaffold5 | 5 | CH_bvu_392 | 3 | 5 | 0.000181855 |
| Durio zibethinus | NW_019168026.1 | 5 | CH_dzi_318 | 3 | 3 | 0.0000117747 |
| Lonicera japonica | GWHAAZE00000009 | 5 | CH_lonja_617 | 3 | 3 | 0.00000715529 |
| Magnolia biondii | Chr05 | 5 | CH_mbi_1233 | 3 | 9 | 0.000770665 |
| Medicago truncatula | chr3 | 5 | CH_mtr_1301 | 3 | 8 | 0.000413962 |
| Papaver somniferum | NC_039365.1 | 5 | CH_pso_912 | 3 | 5 | 0.0000873454 |
| Sequoiadendron giganteum | chr4 | 5 | CH_sgi_1938 | 3 | 4 | 0.000101605 |
| Sequoiadendron giganteum | chr1 | 5 | CH_sgi_54 | 13 | 15 | 6.59268e-35 |
| Tarenaya hassleriana | NW_010966177.1 | 5 | CH_tha_176 | 3 | 3 | 0.0000297118 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_469 | 5 | CH_tpr_353 | 3 | 3 | 0.0000070139 |
| Vaccinium macrocarpon | chr3_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_330 | 3 | 3 | 0.0000072536 |
| Vitis vinifera | chr1 | 5 | CH_vvi_270 | 4 | 5 | 0.0000000834559 |
| Acer truncatum | chr2 | 6 | CH_acertr_1020 | 3 | 9 | 0.000711818 |
| Beta vulgaris | Chr7_EL10_PGA_scaffold5 | 6 | CH_bvu_392 | 3 | 5 | 0.000181855 |
| Durio zibethinus | NW_019168026.1 | 6 | CH_dzi_318 | 3 | 3 | 0.0000117747 |
| Fragaria x ananassa | Fvb7-2 | 6 | CH_fan_734 | 3 | 3 | 0.0000361047 |
| Lonicera japonica | GWHAAZE00000009 | 6 | CH_lonja_617 | 3 | 3 | 0.00000715529 |
| Magnolia biondii | Chr05 | 6 | CH_mbi_1233 | 3 | 9 | 0.000770665 |
| Medicago truncatula | chr3 | 6 | CH_mtr_1301 | 3 | 8 | 0.000413962 |
| Papaver somniferum | NC_039365.1 | 6 | CH_pso_912 | 3 | 5 | 0.0000873454 |
| Sequoiadendron giganteum | chr4 | 6 | CH_sgi_1938 | 3 | 4 | 0.000101605 |
| Sequoiadendron giganteum | chr1 | 6 | CH_sgi_54 | 13 | 15 | 6.59268e-35 |
| Tarenaya hassleriana | NW_010966177.1 | 6 | CH_tha_176 | 3 | 3 | 0.0000297118 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_469 | 6 | CH_tpr_353 | 3 | 3 | 0.0000070139 |
| Vaccinium macrocarpon | chr3_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_330 | 3 | 3 | 0.0000072536 |
| Vitis vinifera | chr1 | 6 | CH_vvi_270 | 4 | 5 | 0.0000000834559 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |