Functional clusters
Information
- Type InterPro
- Description Dienelactone hydrolase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr4 | 5 | CH_acertr_143 | 4 | 6 | 0.00000000055174 |
| Aquilegia oxysepala | CHR05 | 5 | CH_aox_480 | 2 | 2 | 0.000481193 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.11 | 5 | CH_arhy_589 | 3 | 3 | 0.000000611736 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.01 | 5 | CH_arhy_590 | 3 | 3 | 0.000000611736 |
| Amborella trichopoda | AmTr_v1.0_scaffold00025 | 5 | CH_atr_569 | 2 | 2 | 0.000476644 |
| Brassica oleracea | C1 | 5 | CH_bol_889 | 2 | 2 | 0.000915212 |
| Camellia sinensis var. sinensis | Chr9 | 5 | CH_camsi_663 | 3 | 4 | 0.00000151373 |
| Cannabis sativa | NC_044370.1 | 5 | CH_cansat_608 | 2 | 2 | 0.000984963 |
| Cicer arietinum L. | Ca_LG7_v3 | 5 | CH_car_292 | 2 | 2 | 0.00023349 |
| Citrus clementina | scaffold_9 | 5 | CH_ccl_54 | 8 | 13 | 5.01547e-21 |
| Carpinus fangiana | Cfa06 | 5 | CH_cfa_57 | 6 | 7 | 6.73472e-16 |
| Carya illinoinensis | Chr01 | 5 | CH_cil_74 | 6 | 6 | 1.72963e-18 |
| Citrullus lanatus | CG_Chr05 | 5 | CH_cla_335 | 2 | 2 | 0.000532269 |
| Carica papaya | supercontig_16 | 5 | CH_cpa_59 | 4 | 6 | 0.000000000193307 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4480 | 5 | CH_cqu_318 | 3 | 3 | 0.000000117869 |
| Capsella rubella | scaffold_3 | 5 | CH_cru_340 | 3 | 5 | 0.00000448913 |
| Davidia involucrata | GWHABJS00000016 | 5 | CH_din_238 | 3 | 3 | 0.0000000750394 |
| Durio zibethinus | NW_019168026.1 | 5 | CH_dzi_532 | 2 | 2 | 0.000463489 |
| Erigeron canadensis | Conyza_canadensis_scaffold:4 | 5 | CH_eca_94 | 4 | 4 | 0.00000000000948749 |
| Eucalyptus grandis | Chr11 | 5 | CH_egr_1093 | 3 | 5 | 0.00005853 |
| Eucalyptus grandis | Chr02 | 5 | CH_egr_252 | 6 | 6 | 5.99089e-16 |
| Eucalyptus grandis | Chr08 | 5 | CH_egr_88 | 9 | 9 | 3.28066e-26 |
| Glycine max | Gm07 | 5 | CH_gma_179 | 4 | 4 | 0.000000000223929 |
| Glycine max | Gm17 | 5 | CH_gma_253 | 4 | 7 | 0.00000000783313 |
| Gossypium raimondii | Chr05 | 5 | CH_gra_664 | 2 | 2 | 0.00080416 |
| Helianthus annuus | HanXRQChr10 | 5 | CH_han_121 | 6 | 12 | 0.00000000000000537582 |
| Lotus japonicus | chr4 | 5 | CH_lja_281 | 3 | 3 | 0.00000219371 |
| Lonicera japonica | GWHAAZE00000003 | 5 | CH_lonja_504 | 3 | 3 | 0.00000064559 |
| Magnolia biondii | Chr10 | 5 | CH_mbi_270 | 4 | 12 | 0.00000000255052 |
| Malus domestica | Chr16 | 5 | CH_mdo_149 | 5 | 6 | 0.000000000000575769 |
| Malus domestica | Chr13 | 5 | CH_mdo_81 | 6 | 8 | 6.11279e-16 |
| Manihot esculenta | Chromosome03 | 5 | CH_mes_285 | 3 | 3 | 0.000000111865 |
| Medicago truncatula | chr4 | 5 | CH_mtr_316 | 4 | 5 | 0.0000000000728233 |
| Oryza sativa ssp. japonica | chr05 | 5 | CH_osa_220 | 4 | 10 | 0.0000000183597 |
| Oryza sativa ssp. japonica | chr11 | 5 | CH_osa_349 | 3 | 4 | 0.00000276081 |
| Oryza sativa ssp. japonica | chr08 | 5 | CH_osa_432 | 3 | 7 | 0.0000241437 |
| Petunia axillaris | Peaxi162Scf00095 | 5 | CH_pax_533 | 2 | 2 | 0.000211067 |
| Prunus persica | Pp01 | 5 | CH_ppe_199 | 4 | 4 | 0.0000000000871804 |
| Pisum sativum | chr4LG4 | 5 | CH_psa_225 | 3 | 3 | 0.000000081633 |
| Papaver somniferum | NC_039358.1 | 5 | CH_pso_594 | 3 | 4 | 0.00000138553 |
| Phaseolus vulgaris | Chr05 | 5 | CH_pvu_168 | 4 | 5 | 0.00000000196302 |
| Quercus lobata | 6 | 5 | CH_qlo_54 | 11 | 17 | 8.03547e-31 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 5 | CH_rch_49 | 10 | 15 | 1.90836e-27 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 5 | CH_rch_786 | 3 | 3 | 0.00000317059 |
| Rhododendron simsii | chr04 | 5 | CH_rsi_282 | 4 | 6 | 0.000000000846319 |
| Salvia bowleyana | GWHASIU00000007 | 5 | CH_sbo_264 | 3 | 3 | 0.0000000310517 |
| Salix brachista | GWHAAZH00000008 | 5 | CH_sbr_694 | 2 | 2 | 0.000945209 |
| Simmondsia chinensis | GWHAASQ00000013 | 5 | CH_sci_449 | 2 | 2 | 0.000510856 |
| Sequoiadendron giganteum | chr3 | 5 | CH_sgi_336 | 5 | 5 | 0.00000000000000236575 |
| Solanum tuberosum | ST4.03ch01 | 5 | CH_stu_909 | 2 | 2 | 0.000768679 |
| Solanum tuberosum | ST4.03ch11 | 5 | CH_stu_910 | 2 | 2 | 0.000768679 |
| Selenicereus undatus | Scaffold_33679 | 5 | CH_sun_78 | 3 | 3 | 0.0000000792034 |
| Trochodendron aralioides | group17 | 5 | CH_tar_376 | 3 | 5 | 0.00000302692 |
| Theobroma cacao | Chromosome_4 | 5 | CH_tca_681 | 2 | 2 | 0.000439432 |
| Tarenaya hassleriana | NW_010964923.1 | 5 | CH_tha_43 | 5 | 10 | 0.0000000000355919 |
| Tarenaya hassleriana | NW_010972002.1 | 5 | CH_tha_93 | 4 | 8 | 0.0000000353887 |
| Vaccinium macrocarpon | chr6_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_82 | 5 | 11 | 0.00000000000542287 |
| Vigna mungo | CM024079.1 | 5 | CH_vmu_207 | 3 | 3 | 0.000000751521 |
| Vitis vinifera | chr7 | 5 | CH_vvi_158 | 4 | 4 | 0.0000000000924249 |
| Acer truncatum | chr4 | 6 | CH_acertr_143 | 4 | 6 | 0.00000000055174 |
| Aquilegia oxysepala | CHR05 | 6 | CH_aox_480 | 2 | 2 | 0.000481193 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.11 | 6 | CH_arhy_589 | 3 | 3 | 0.000000611736 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.01 | 6 | CH_arhy_590 | 3 | 3 | 0.000000611736 |
| Amborella trichopoda | AmTr_v1.0_scaffold00025 | 6 | CH_atr_569 | 2 | 2 | 0.000476644 |
| Brassica oleracea | C1 | 6 | CH_bol_889 | 2 | 2 | 0.000915212 |
| Camellia sinensis var. sinensis | Chr9 | 6 | CH_camsi_663 | 3 | 4 | 0.00000151373 |
| Cannabis sativa | NC_044370.1 | 6 | CH_cansat_608 | 2 | 2 | 0.000984963 |
| Cicer arietinum L. | Ca_LG7_v3 | 6 | CH_car_292 | 2 | 2 | 0.00023349 |
| Citrus clementina | scaffold_9 | 6 | CH_ccl_54 | 8 | 13 | 5.01547e-21 |
| Carpinus fangiana | Cfa06 | 6 | CH_cfa_57 | 6 | 7 | 6.73472e-16 |
| Carya illinoinensis | Chr01 | 6 | CH_cil_74 | 6 | 6 | 1.72963e-18 |
| Citrullus lanatus | CG_Chr05 | 6 | CH_cla_335 | 2 | 2 | 0.000532269 |
| Cucumis melo | chr06 | 6 | CH_cme_413 | 2 | 2 | 0.000400267 |
| Carica papaya | supercontig_16 | 6 | CH_cpa_59 | 4 | 6 | 0.000000000193307 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4480 | 6 | CH_cqu_318 | 3 | 3 | 0.000000117869 |
| Capsella rubella | scaffold_3 | 6 | CH_cru_340 | 3 | 5 | 0.00000448913 |
| Davidia involucrata | GWHABJS00000016 | 6 | CH_din_238 | 3 | 3 | 0.0000000750394 |
| Durio zibethinus | NW_019168026.1 | 6 | CH_dzi_532 | 2 | 2 | 0.000463489 |
| Erigeron canadensis | Conyza_canadensis_scaffold:4 | 6 | CH_eca_94 | 4 | 4 | 0.00000000000948749 |
| Eucalyptus grandis | Chr11 | 6 | CH_egr_1093 | 3 | 5 | 0.00005853 |
| Eucalyptus grandis | Chr02 | 6 | CH_egr_252 | 6 | 6 | 5.99089e-16 |
| Eucalyptus grandis | Chr08 | 6 | CH_egr_88 | 9 | 9 | 3.28066e-26 |
| Glycine max | Gm07 | 6 | CH_gma_179 | 4 | 4 | 0.000000000223929 |
| Glycine max | Gm17 | 6 | CH_gma_253 | 4 | 7 | 0.00000000783313 |
| Gossypium raimondii | Chr05 | 6 | CH_gra_664 | 2 | 2 | 0.00080416 |
| Helianthus annuus | HanXRQChr10 | 6 | CH_han_121 | 6 | 12 | 0.00000000000000537582 |
| Lotus japonicus | chr4 | 6 | CH_lja_281 | 3 | 3 | 0.00000219371 |
| Lonicera japonica | GWHAAZE00000003 | 6 | CH_lonja_504 | 3 | 3 | 0.00000064559 |
| Magnolia biondii | Chr10 | 6 | CH_mbi_270 | 4 | 12 | 0.00000000255052 |
| Malus domestica | Chr16 | 6 | CH_mdo_149 | 5 | 6 | 0.000000000000575769 |
| Malus domestica | Chr13 | 6 | CH_mdo_81 | 6 | 8 | 6.11279e-16 |
| Manihot esculenta | Chromosome03 | 6 | CH_mes_285 | 3 | 3 | 0.000000111865 |
| Medicago truncatula | chr4 | 6 | CH_mtr_316 | 4 | 5 | 0.0000000000728233 |
| Oryza sativa ssp. japonica | chr05 | 6 | CH_osa_220 | 4 | 10 | 0.0000000183597 |
| Oryza sativa ssp. japonica | chr11 | 6 | CH_osa_349 | 3 | 4 | 0.00000276081 |
| Oryza sativa ssp. japonica | chr08 | 6 | CH_osa_432 | 3 | 7 | 0.0000241437 |
| Petunia axillaris | Peaxi162Scf00095 | 6 | CH_pax_533 | 2 | 2 | 0.000211067 |
| Prunus persica | Pp01 | 6 | CH_ppe_199 | 4 | 4 | 0.0000000000871804 |
| Pisum sativum | chr4LG4 | 6 | CH_psa_225 | 3 | 3 | 0.000000081633 |
| Papaver somniferum | NC_039358.1 | 6 | CH_pso_594 | 3 | 4 | 0.00000138553 |
| Phaseolus vulgaris | Chr05 | 6 | CH_pvu_168 | 4 | 5 | 0.00000000196302 |
| Quercus lobata | 6 | 6 | CH_qlo_54 | 11 | 17 | 8.03547e-31 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 6 | CH_rch_49 | 10 | 15 | 1.90836e-27 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 6 | CH_rch_786 | 3 | 3 | 0.00000317059 |
| Rhododendron simsii | chr04 | 6 | CH_rsi_282 | 4 | 6 | 0.000000000846319 |
| Salvia bowleyana | GWHASIU00000007 | 6 | CH_sbo_264 | 3 | 3 | 0.0000000310517 |
| Salix brachista | GWHAAZH00000008 | 6 | CH_sbr_694 | 2 | 2 | 0.000945209 |
| Simmondsia chinensis | GWHAASQ00000013 | 6 | CH_sci_449 | 2 | 2 | 0.000510856 |
| Sequoiadendron giganteum | chr3 | 6 | CH_sgi_336 | 5 | 5 | 0.00000000000000236575 |
| Solanum tuberosum | ST4.03ch01 | 6 | CH_stu_909 | 2 | 2 | 0.000768679 |
| Solanum tuberosum | ST4.03ch11 | 6 | CH_stu_910 | 2 | 2 | 0.000768679 |
| Selenicereus undatus | Scaffold_33679 | 6 | CH_sun_78 | 3 | 3 | 0.0000000792034 |
| Trochodendron aralioides | group17 | 6 | CH_tar_376 | 3 | 5 | 0.00000302692 |
| Theobroma cacao | Chromosome_4 | 6 | CH_tca_681 | 2 | 2 | 0.000439432 |
| Tarenaya hassleriana | NW_010964923.1 | 6 | CH_tha_43 | 5 | 10 | 0.0000000000355919 |
| Tarenaya hassleriana | NW_010972002.1 | 6 | CH_tha_93 | 4 | 8 | 0.0000000353887 |
| Vaccinium macrocarpon | chr6_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_82 | 5 | 11 | 0.00000000000542287 |
| Vigna mungo | CM024079.1 | 6 | CH_vmu_207 | 3 | 3 | 0.000000751521 |
| Vitis vinifera | chr7 | 6 | CH_vvi_158 | 4 | 4 | 0.0000000000924249 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |