Functional clusters

Information

  • Type InterPro
  • Description tRNA methyltransferase, Trm1

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Daucus carota DCARv2_Chr4 5 CH_dca_596 2 2 0.000382665
Eucalyptus grandis Chr07 5 CH_egr_1277 2 2 0.000351165
Gossypium hirsutum D05 5 CH_ghi_1205 2 2 0.000560733
Lonicera japonica GWHAAZE00000001 5 CH_lonja_905 2 2 0.000179662
Malus domestica Chr01 5 CH_mdo_1225 2 2 0.000379212
Nelumbo nucifera chr3 5 CH_nnu_501 2 2 0.00028901
Oryza sativa ssp. japonica chr05 5 CH_osa_635 2 2 0.000316874
Sequoiadendron giganteum chr7 5 CH_sgi_2034 2 2 0.000146145
Solanum lycopersicum SL4.0ch03 5 CH_sly_799 2 2 0.000352164
Solanum tuberosum ST4.03ch03 5 CH_stu_779 2 2 0.000307472
Vanilla planifolia CM028154.1 5 CH_vpl_681 3 52 0.000721656
Daucus carota DCARv2_Chr4 6 CH_dca_596 2 2 0.000382665
Eucalyptus grandis Chr07 6 CH_egr_1277 2 2 0.000351165
Gossypium hirsutum D05 6 CH_ghi_1205 2 2 0.000560733
Lonicera japonica GWHAAZE00000001 6 CH_lonja_905 2 2 0.000179662
Malus domestica Chr01 6 CH_mdo_1225 2 2 0.000379212
Nelumbo nucifera chr3 6 CH_nnu_501 2 2 0.00028901
Oryza sativa ssp. japonica chr05 6 CH_osa_635 2 2 0.000316874
Sequoiadendron giganteum chr7 6 CH_sgi_2034 2 2 0.000146145
Solanum lycopersicum SL4.0ch03 6 CH_sly_799 2 2 0.000352164
Solanum tuberosum ST4.03ch03 6 CH_stu_779 2 2 0.000307472
Vanilla planifolia CM028154.1 6 CH_vpl_681 3 52 0.000721656

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001