Functional clusters

Information

  • Type InterPro
  • Description Pentatricopeptide repeat

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_228 5 CH_aag_110 12 14 0.000000490046
Anthoceros agrestis Sc2ySwM_228 5 CH_aag_218 14 25 0.0000871554
Anthoceros agrestis Sc2ySwM_228 5 CH_aag_227 15 29 0.00010357
Anthoceros agrestis Sc2ySwM_344 5 CH_aag_70 14 16 0.00000000511215
Anthoceros agrestis Sc2ySwM_368 5 CH_aag_78 20 35 0.0000000215937
Acer truncatum chr1 5 CH_acertr_1022 5 6 0.000743678
Acer truncatum chr6 5 CH_acertr_257 9 14 0.0000000464064
Acer truncatum chr13 5 CH_acertr_679 5 5 0.000126186
Arabidopsis lyrata scaffold_2 5 CH_aly_84 19 77 0.00000000000167169
Aquilegia oxysepala CHR04 5 CH_aox_84 15 42 0.000000000513581
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 5 CH_arhy_1117 7 16 0.000344359
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.20 5 CH_arhy_1118 11 58 0.00034595
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 5 CH_arhy_149 13 15 1.00234e-16
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.07 5 CH_arhy_195 13 19 0.0000000000000242632
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 5 CH_arhy_212 12 16 0.0000000000000964422
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.11 5 CH_arhy_25 28 37 4.00937e-37
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 5 CH_arhy_27 30 46 8.40434e-37
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 5 CH_arhy_30 30 48 5.99169e-36
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 5 CH_arhy_657 6 6 0.00000197319
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.07 5 CH_arhy_967 7 14 0.000106546
Arabidopsis thaliana Chr1 5 CH_ath_621 8 63 0.000751877
Amborella trichopoda AmTr_v1.0_scaffold00074 5 CH_atr_101 10 12 0.000000000081689
Amborella trichopoda AmTr_v1.0_scaffold00029 5 CH_atr_445 5 5 0.000184112
Brassica carinata ChrC08 5 CH_bca_1079 5 5 0.0000130511
Brassica carinata ChrC07 5 CH_bca_1264 10 58 0.0000582266
Brassica carinata ChrC03 5 CH_bca_1976 5 8 0.000711543
Brassica carinata ChrB08 5 CH_bca_578 7 10 0.000000172759
Brassica carinata ChrC08 5 CH_bca_698 10 38 0.000000640081
Brassica carinata ChrC09 5 CH_bca_933 6 8 0.00000382342
Brassica napus C01 5 CH_bna_565 6 7 0.000000794823
Brassica napus C08 5 CH_bna_936 10 57 0.0000328923
Beta vulgaris Chr4_EL10_PGA_scaffold1 5 CH_bvu_159 16 80 0.0000000458954
Beta vulgaris Chr4_EL10_PGA_scaffold1 5 CH_bvu_27 24 74 4.50428e-19
Beta vulgaris Chr8_EL10_PGA_scaffold4 5 CH_bvu_378 7 14 0.000114623
Camellia sinensis var. sinensis Chr10 5 CH_camsi_964 6 9 0.0000469
Cicer arietinum L. Ca_LG8_v3 5 CH_car_53 13 38 0.0000000240274
Corylus avellana 2 5 CH_cav_853 8 25 0.000991751
Coffea canephora chr7 5 CH_ccan_199 7 68 0.00000044819
Coffea canephora chr10 5 CH_ccan_535 4 12 0.000192499
Coffea canephora chr2 5 CH_ccan_657 3 3 0.000556679
Coffea canephora chr2 5 CH_ccan_702 4 15 0.000793562
Citrus clementina scaffold_8 5 CH_ccl_271 16 73 0.0000000317757
Cardamine hirsuta Chr2 5 CH_chi_50 23 78 5.53474e-18
Cardamine hirsuta Chr2 5 CH_chi_658 5 6 0.000243326
Carya illinoinensis Chr08 5 CH_cil_179 11 18 0.0000000000169305
Carya illinoinensis Chr01 5 CH_cil_208 9 11 0.000000000124324
Chenopodium quinoa C_Quinoa_Scaffold_3820 5 CH_cqu_120 19 59 0.000000000000342969
Chenopodium quinoa C_Quinoa_Scaffold_2088 5 CH_cqu_382 16 80 0.000000461076
Chenopodium quinoa C_Quinoa_Scaffold_2088 5 CH_cqu_44 26 72 9.63032e-21
Chenopodium quinoa C_Quinoa_Scaffold_3429 5 CH_cqu_522 12 46 0.00000641744
Chenopodium quinoa C_Quinoa_Scaffold_3429 5 CH_cqu_644 13 66 0.0000484733
Chenopodium quinoa C_Quinoa_Scaffold_2008 5 CH_cqu_789 5 5 0.000177919
Chenopodium quinoa C_Quinoa_Scaffold_2088 5 CH_cqu_958 13 80 0.000568559
Davidia involucrata GWHABJS00000002 5 CH_din_365 7 11 0.00000466051
Davidia involucrata GWHABJS00000005 5 CH_din_369 8 17 0.00000531077
Durio zibethinus NW_019167926.1 5 CH_dzi_390 6 11 0.000049011
Erigeron canadensis Conyza_canadensis_scaffold:5 5 CH_eca_200 14 78 0.0000000101392
Erigeron canadensis Conyza_canadensis_scaffold:2 5 CH_eca_731 5 8 0.000426938
Eucalyptus grandis Chr01 5 CH_egr_198 19 44 3.91049e-18
Erythranthe guttata scaffold_7 5 CH_egut_18 30 46 1.5027e-35
Erythranthe guttata scaffold_11 5 CH_egut_362 10 28 0.00000281552
Erythranthe guttata scaffold_5 5 CH_egut_422 6 7 0.0000127952
Erythranthe guttata scaffold_6 5 CH_egut_454 13 69 0.000032033
Eutrema salsugineum scaffold_8 5 CH_esa_377 9 34 0.000180055
Gossypium hirsutum D05 5 CH_ghi_164 19 67 0.00000000000000950814
Gossypium hirsutum A04 5 CH_ghi_590 9 23 0.00000140892
Glycine max Gm09 5 CH_gma_185 11 21 0.00000000032898
Glycine max Gm16 5 CH_gma_532 7 13 0.0000249904
Gossypium raimondii Chr09 5 CH_gra_34 27 79 1.15938e-24
Helianthus annuus HanXRQChr07 5 CH_han_126 12 17 0.00000000000000819638
Helianthus annuus HanXRQChr13 5 CH_han_454 7 9 0.000000128228
Helianthus annuus HanXRQChr06 5 CH_han_548 7 11 0.00000114852
Helianthus annuus HanXRQChr03 5 CH_han_7 30 57 1.34919e-36
Helianthus annuus HanXRQChr08 5 CH_han_744 5 5 0.0000210211
Helianthus annuus HanXRQChr14 5 CH_han_745 5 5 0.0000210211
Hydrangea macrophylla Hma1.2p1_0472F.1 5 CH_hma_197 8 19 0.00000234272
Hydrangea macrophylla Hma1.2p1_0310F.1 5 CH_hma_675 4 4 0.000826175
Hydrangea macrophylla Hma1.2p1_0744F.1 5 CH_hma_676 4 4 0.000826175
Hydrangea macrophylla Hma1.2p1_1484F.1 5 CH_hma_677 4 4 0.000826175
Lotus japonicus chr2 5 CH_lja_372 13 72 0.0000374937
Lonicera japonica GWHAAZE00000004 5 CH_lonja_1099 8 23 0.000392386
Lonicera japonica GWHAAZE00000008 5 CH_lonja_625 9 22 0.00000839851
Lactuca sativa Lsat_1_v8_lg_3 5 CH_lsa_248 12 37 0.00000000276601
Lactuca sativa Lsat_1_v8_lg_6 5 CH_lsa_560 5 5 0.0000209796
Magnolia biondii Chr19 5 CH_mbi_679 6 7 0.0000203331
Magnolia biondii Chr07 5 CH_mbi_817 6 8 0.0000799154
Magnolia biondii Chr05 5 CH_mbi_850 5 5 0.000145435
Magnolia biondii Chr19 5 CH_mbi_851 5 5 0.000145435
Malus domestica Chr03 5 CH_mdo_254 8 8 0.000000000290585
Malus domestica Chr04 5 CH_mdo_466 10 24 0.000000124414
Malus domestica Chr11 5 CH_mdo_753 12 60 0.000014163
Manihot esculenta Chromosome09 5 CH_mes_10 30 32 4.24931e-45
Manihot esculenta Chromosome09 5 CH_mes_15 28 33 5.51296e-39
Manihot esculenta Chromosome13 5 CH_mes_399 10 29 0.00000355066
Manihot esculenta Chromosome07 5 CH_mes_527 5 5 0.0000918699
Manihot esculenta Chromosome09 5 CH_mes_9 30 32 4.24931e-45
Medicago truncatula chr7 5 CH_mtr_1112 5 6 0.000154712
Medicago truncatula chr6 5 CH_mtr_40 26 50 1.79112e-30
Medicago truncatula chr6 5 CH_mtr_824 6 8 0.00000993367
Medicago truncatula chr6 5 CH_mtr_893 10 46 0.0000348543
Nicotiana tabacum Nitab4.5_0000428 5 CH_nta_6 17 29 2.5389e-19
Petunia axillaris Peaxi162Scf00342 5 CH_pax_11 18 27 3.37633e-22
Petunia axillaris Peaxi162Scf00158 5 CH_pax_119 8 9 0.000000000952072
Petunia axillaris Peaxi162Scf00129 5 CH_pax_496 7 17 0.000116347
Petunia axillaris Peaxi162Scf00154 5 CH_pax_94 9 11 0.0000000000894068
Prunus persica Pp06 5 CH_ppe_786 11 56 0.000465005
Papaver somniferum NC_039367.1 5 CH_pso_1170 5 8 0.000527792
Papaver somniferum NC_039358.1 5 CH_pso_123 16 48 0.00000000000000176253
Papaver somniferum NC_039358.1 5 CH_pso_349 10 26 0.00000000469532
Papaver somniferum NW_020620714.1 5 CH_pso_35 21 53 2.47112e-23
Papaver somniferum NC_039364.1 5 CH_pso_598 7 13 0.00000161493
Papaver somniferum NC_039362.1 5 CH_pso_860 5 6 0.0000575179
Papaver somniferum NC_039362.1 5 CH_pso_929 7 21 0.000101918
Populus trichocarpa Chr05 5 CH_ptr_179 15 52 0.0000000000629075
Quercus lobata 9 5 CH_qlo_1120 6 7 0.0000152674
Quercus lobata 1 5 CH_qlo_1750 5 6 0.000669017
Quercus lobata 3 5 CH_qlo_293 22 79 0.00000000000000588198
Rosa chinensis RcHm_v2.0_Chr5 5 CH_rch_1366 5 6 0.000544912
Rosa chinensis RcHm_v2.0_Chr5 5 CH_rch_1367 5 6 0.000544912
Rosa chinensis RcHm_v2.0_Chr1 5 CH_rch_1368 9 36 0.000565542
Rosa chinensis RcHm_v2.0_Chr5 5 CH_rch_1422 6 11 0.000703564
Rosa chinensis RcHm_v2.0_Chr4 5 CH_rch_574 12 39 0.000000129908
Rosa chinensis RcHm_v2.0_Chr5 5 CH_rch_614 14 62 0.000000212497
Rosa chinensis RcHm_v2.0_Chr3 5 CH_rch_719 11 36 0.00000116665
Rosa chinensis RcHm_v2.0_Chr3 5 CH_rch_733 8 14 0.00000142406
Rhododendron simsii chr03 5 CH_rsi_508 13 60 0.00000235187
Rhododendron simsii chr04 5 CH_rsi_559 6 7 0.00000931523
Salvia bowleyana GWHASIU00000006 5 CH_sbo_110 13 21 0.00000000000000452242
Salvia bowleyana GWHASIU00000006 5 CH_sbo_16 30 52 6.32848e-38
Salvia bowleyana GWHASIU00000001 5 CH_sbo_256 11 33 0.0000000198233
Salvia bowleyana GWHASIU00000001 5 CH_sbo_394 12 66 0.00000455709
Salvia bowleyana GWHASIU00000001 5 CH_sbo_463 12 78 0.0000345982
Salvia bowleyana GWHASIU00000001 5 CH_sbo_673 11 77 0.000395694
Salvia bowleyana GWHASIU00000007 5 CH_sbo_684 5 7 0.00043828
Salvia bowleyana GWHASIU00000002 5 CH_sbo_685 5 7 0.00043828
Salix brachista GWHAAZH00000018 5 CH_sbr_718 9 41 0.000982305
Simmondsia chinensis GWHAASQ00000025 5 CH_sci_423 5 6 0.000350089
Sequoiadendron giganteum chr4 5 CH_sgi_1150 7 8 0.000000259077
Sequoiadendron giganteum chr1 5 CH_sgi_1334 6 6 0.00000176658
Sequoiadendron giganteum chr5 5 CH_sgi_1390 7 10 0.00000376047
Sequoiadendron giganteum chr1 5 CH_sgi_1477 11 43 0.0000130387
Sequoiadendron giganteum chr6 5 CH_sgi_1931 5 6 0.0000946732
Sequoiadendron giganteum chr4 5 CH_sgi_519 19 72 0.00000000000242309
Selaginella moellendorffii scaffold_49 5 CH_smo_297 10 18 0.000406597
Selenicereus undatus Scaffold_33680 5 CH_sun_119 9 59 0.00000401364
Selenicereus undatus Scaffold_2055 5 CH_sun_159 8 53 0.0000474705
Trochodendron aralioides group11 5 CH_tar_734 5 5 0.000288451
Tarenaya hassleriana NW_010962392.1 5 CH_tha_14 19 44 5.20048e-18
Tarenaya hassleriana NW_010964923.1 5 CH_tha_180 5 5 0.0000411768
Tripterygium wilfordii NC_052253.1 5 CH_twi_377 6 11 0.0001236
Tripterygium wilfordii NC_052240.1 5 CH_twi_419 7 19 0.000173204
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_253 11 41 0.000000543114
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_368 5 5 0.0000199612
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_46 14 23 6.56086e-16
Vigna mungo CM024078.1 5 CH_vmu_211 12 48 0.000000973281
Vanilla planifolia CM028155.1 5 CH_vpl_653 7 15 0.000479985
Vanilla planifolia CM028150.1 5 CH_vpl_744 5 6 0.000996638
Zea mays 2 5 CH_zma_456 8 32 0.000353006
Anthoceros agrestis Sc2ySwM_228 6 CH_aag_110 12 14 0.000000490046
Anthoceros agrestis Sc2ySwM_228 6 CH_aag_218 14 25 0.0000871554
Anthoceros agrestis Sc2ySwM_228 6 CH_aag_227 15 29 0.00010357
Anthoceros agrestis Sc2ySwM_344 6 CH_aag_70 14 16 0.00000000511215
Anthoceros agrestis Sc2ySwM_368 6 CH_aag_78 20 35 0.0000000215937
Acer truncatum chr1 6 CH_acertr_1022 5 6 0.000743678
Acer truncatum chr6 6 CH_acertr_257 9 14 0.0000000464064
Acer truncatum chr13 6 CH_acertr_679 5 5 0.000126186
Arabidopsis lyrata scaffold_2 6 CH_aly_84 19 77 0.00000000000167169
Aquilegia oxysepala CHR04 6 CH_aox_84 15 42 0.000000000513581
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 6 CH_arhy_1117 7 16 0.000344359
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.20 6 CH_arhy_1118 11 58 0.00034595
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 6 CH_arhy_149 13 15 1.00234e-16
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.07 6 CH_arhy_195 13 19 0.0000000000000242632
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 6 CH_arhy_212 12 16 0.0000000000000964422
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.11 6 CH_arhy_25 28 37 4.00937e-37
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 6 CH_arhy_27 30 46 8.40434e-37
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 6 CH_arhy_30 30 48 5.99169e-36
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.05 6 CH_arhy_657 6 6 0.00000197319
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.07 6 CH_arhy_967 7 14 0.000106546
Arabidopsis thaliana Chr1 6 CH_ath_621 8 63 0.000751877
Amborella trichopoda AmTr_v1.0_scaffold00074 6 CH_atr_101 10 12 0.000000000081689
Amborella trichopoda AmTr_v1.0_scaffold00029 6 CH_atr_445 5 5 0.000184112
Brassica carinata ChrC08 6 CH_bca_1079 5 5 0.0000130511
Brassica carinata ChrC07 6 CH_bca_1264 10 58 0.0000582266
Brassica carinata ChrC03 6 CH_bca_1976 5 8 0.000711543
Brassica carinata ChrB08 6 CH_bca_578 7 10 0.000000172759
Brassica carinata ChrC08 6 CH_bca_698 10 38 0.000000640081
Brassica carinata ChrC09 6 CH_bca_933 6 8 0.00000382342
Brassica napus C01 6 CH_bna_565 6 7 0.000000794823
Brassica napus C08 6 CH_bna_936 10 57 0.0000328923
Beta vulgaris Chr4_EL10_PGA_scaffold1 6 CH_bvu_159 16 80 0.0000000458954
Beta vulgaris Chr4_EL10_PGA_scaffold1 6 CH_bvu_27 24 74 4.50428e-19
Beta vulgaris Chr8_EL10_PGA_scaffold4 6 CH_bvu_378 7 14 0.000114623
Camellia sinensis var. sinensis Chr10 6 CH_camsi_964 6 9 0.0000469
Cicer arietinum L. Ca_LG8_v3 6 CH_car_53 13 38 0.0000000240274
Corylus avellana 2 6 CH_cav_853 8 25 0.000991751
Coffea canephora chr7 6 CH_ccan_199 7 68 0.00000044819
Coffea canephora chr10 6 CH_ccan_535 4 12 0.000192499
Coffea canephora chr2 6 CH_ccan_657 3 3 0.000556679
Coffea canephora chr2 6 CH_ccan_702 4 15 0.000793562
Citrus clementina scaffold_8 6 CH_ccl_271 16 73 0.0000000317757
Cardamine hirsuta Chr2 6 CH_chi_50 23 78 5.53474e-18
Cardamine hirsuta Chr2 6 CH_chi_658 5 6 0.000243326
Carya illinoinensis Chr08 6 CH_cil_179 11 18 0.0000000000169305
Carya illinoinensis Chr01 6 CH_cil_208 9 11 0.000000000124324
Chenopodium quinoa C_Quinoa_Scaffold_3820 6 CH_cqu_120 19 59 0.000000000000342969
Chenopodium quinoa C_Quinoa_Scaffold_2088 6 CH_cqu_382 16 80 0.000000461076
Chenopodium quinoa C_Quinoa_Scaffold_2088 6 CH_cqu_44 26 72 9.63032e-21
Chenopodium quinoa C_Quinoa_Scaffold_3429 6 CH_cqu_522 12 46 0.00000641744
Chenopodium quinoa C_Quinoa_Scaffold_3429 6 CH_cqu_644 13 66 0.0000484733
Chenopodium quinoa C_Quinoa_Scaffold_2008 6 CH_cqu_789 5 5 0.000177919
Chenopodium quinoa C_Quinoa_Scaffold_2088 6 CH_cqu_958 13 80 0.000568559
Davidia involucrata GWHABJS00000002 6 CH_din_365 7 11 0.00000466051
Davidia involucrata GWHABJS00000005 6 CH_din_369 8 17 0.00000531077
Durio zibethinus NW_019167926.1 6 CH_dzi_390 6 11 0.000049011
Erigeron canadensis Conyza_canadensis_scaffold:5 6 CH_eca_200 14 78 0.0000000101392
Erigeron canadensis Conyza_canadensis_scaffold:2 6 CH_eca_731 5 8 0.000426938
Eucalyptus grandis Chr01 6 CH_egr_198 19 44 3.91049e-18
Erythranthe guttata scaffold_7 6 CH_egut_18 30 46 1.5027e-35
Erythranthe guttata scaffold_11 6 CH_egut_362 10 28 0.00000281552
Erythranthe guttata scaffold_5 6 CH_egut_422 6 7 0.0000127952
Erythranthe guttata scaffold_6 6 CH_egut_454 13 69 0.000032033
Eutrema salsugineum scaffold_8 6 CH_esa_377 9 34 0.000180055
Fragaria x ananassa Fvb3-2 6 CH_fan_587 11 39 0.0000059306
Fragaria x ananassa Fvb7-4 6 CH_fan_636 8 16 0.0000115865
Fragaria x ananassa Fvb6-3 6 CH_fan_943 6 9 0.000263705
Gossypium hirsutum D05 6 CH_ghi_164 19 67 0.00000000000000950814
Gossypium hirsutum A04 6 CH_ghi_590 9 23 0.00000140892
Glycine max Gm09 6 CH_gma_185 11 21 0.00000000032898
Glycine max Gm16 6 CH_gma_532 7 13 0.0000249904
Gossypium raimondii Chr09 6 CH_gra_34 27 79 1.15938e-24
Helianthus annuus HanXRQChr07 6 CH_han_126 12 17 0.00000000000000819638
Helianthus annuus HanXRQChr13 6 CH_han_454 7 9 0.000000128228
Helianthus annuus HanXRQChr06 6 CH_han_548 7 11 0.00000114852
Helianthus annuus HanXRQChr03 6 CH_han_7 30 57 1.34919e-36
Helianthus annuus HanXRQChr08 6 CH_han_744 5 5 0.0000210211
Helianthus annuus HanXRQChr14 6 CH_han_745 5 5 0.0000210211
Hydrangea macrophylla Hma1.2p1_0472F.1 6 CH_hma_197 8 19 0.00000234272
Hydrangea macrophylla Hma1.2p1_0310F.1 6 CH_hma_675 4 4 0.000826175
Hydrangea macrophylla Hma1.2p1_0744F.1 6 CH_hma_676 4 4 0.000826175
Hydrangea macrophylla Hma1.2p1_1484F.1 6 CH_hma_677 4 4 0.000826175
Lotus japonicus chr2 6 CH_lja_372 13 72 0.0000374937
Lonicera japonica GWHAAZE00000004 6 CH_lonja_1099 8 23 0.000392386
Lonicera japonica GWHAAZE00000008 6 CH_lonja_625 9 22 0.00000839851
Lactuca sativa Lsat_1_v8_lg_3 6 CH_lsa_248 12 37 0.00000000276601
Lactuca sativa Lsat_1_v8_lg_6 6 CH_lsa_560 5 5 0.0000209796
Magnolia biondii Chr19 6 CH_mbi_679 6 7 0.0000203331
Magnolia biondii Chr07 6 CH_mbi_817 6 8 0.0000799154
Magnolia biondii Chr05 6 CH_mbi_850 5 5 0.000145435
Magnolia biondii Chr19 6 CH_mbi_851 5 5 0.000145435
Malus domestica Chr03 6 CH_mdo_254 8 8 0.000000000290585
Malus domestica Chr04 6 CH_mdo_466 10 24 0.000000124414
Malus domestica Chr11 6 CH_mdo_753 12 60 0.000014163
Manihot esculenta Chromosome09 6 CH_mes_10 30 32 4.24931e-45
Manihot esculenta Chromosome09 6 CH_mes_15 28 33 5.51296e-39
Manihot esculenta Chromosome13 6 CH_mes_399 10 29 0.00000355066
Manihot esculenta Chromosome07 6 CH_mes_527 5 5 0.0000918699
Manihot esculenta Chromosome09 6 CH_mes_9 30 32 4.24931e-45
Medicago truncatula chr7 6 CH_mtr_1112 5 6 0.000154712
Medicago truncatula chr6 6 CH_mtr_40 26 50 1.79112e-30
Medicago truncatula chr6 6 CH_mtr_824 6 8 0.00000993367
Medicago truncatula chr6 6 CH_mtr_893 10 46 0.0000348543
Nicotiana tabacum Nitab4.5_0000428 6 CH_nta_6 17 29 2.5389e-19
Petunia axillaris Peaxi162Scf00342 6 CH_pax_11 18 27 3.37633e-22
Petunia axillaris Peaxi162Scf00158 6 CH_pax_119 8 9 0.000000000952072
Petunia axillaris Peaxi162Scf00129 6 CH_pax_496 7 17 0.000116347
Petunia axillaris Peaxi162Scf00154 6 CH_pax_94 9 11 0.0000000000894068
Prunus persica Pp06 6 CH_ppe_786 11 56 0.000465005
Papaver somniferum NC_039367.1 6 CH_pso_1170 5 8 0.000527792
Papaver somniferum NC_039358.1 6 CH_pso_123 16 48 0.00000000000000176253
Papaver somniferum NC_039358.1 6 CH_pso_349 10 26 0.00000000469532
Papaver somniferum NW_020620714.1 6 CH_pso_35 21 53 2.47112e-23
Papaver somniferum NC_039364.1 6 CH_pso_598 7 13 0.00000161493
Papaver somniferum NC_039362.1 6 CH_pso_860 5 6 0.0000575179
Papaver somniferum NC_039362.1 6 CH_pso_929 7 21 0.000101918
Populus trichocarpa Chr05 6 CH_ptr_179 15 52 0.0000000000629075
Quercus lobata 9 6 CH_qlo_1120 6 7 0.0000152674
Quercus lobata 1 6 CH_qlo_1750 5 6 0.000669017
Quercus lobata 3 6 CH_qlo_293 22 79 0.00000000000000588198
Rosa chinensis RcHm_v2.0_Chr5 6 CH_rch_1366 5 6 0.000544912
Rosa chinensis RcHm_v2.0_Chr5 6 CH_rch_1367 5 6 0.000544912
Rosa chinensis RcHm_v2.0_Chr1 6 CH_rch_1368 9 36 0.000565542
Rosa chinensis RcHm_v2.0_Chr5 6 CH_rch_1422 6 11 0.000703564
Rosa chinensis RcHm_v2.0_Chr4 6 CH_rch_574 12 39 0.000000129908
Rosa chinensis RcHm_v2.0_Chr5 6 CH_rch_614 14 62 0.000000212497
Rosa chinensis RcHm_v2.0_Chr3 6 CH_rch_719 11 36 0.00000116665
Rosa chinensis RcHm_v2.0_Chr3 6 CH_rch_733 8 14 0.00000142406
Rhododendron simsii chr03 6 CH_rsi_508 13 60 0.00000235187
Rhododendron simsii chr04 6 CH_rsi_559 6 7 0.00000931523
Salvia bowleyana GWHASIU00000006 6 CH_sbo_110 13 21 0.00000000000000452242
Salvia bowleyana GWHASIU00000006 6 CH_sbo_16 30 52 6.32848e-38
Salvia bowleyana GWHASIU00000001 6 CH_sbo_256 11 33 0.0000000198233
Salvia bowleyana GWHASIU00000001 6 CH_sbo_394 12 66 0.00000455709
Salvia bowleyana GWHASIU00000001 6 CH_sbo_463 12 78 0.0000345982
Salvia bowleyana GWHASIU00000001 6 CH_sbo_673 11 77 0.000395694
Salvia bowleyana GWHASIU00000007 6 CH_sbo_684 5 7 0.00043828
Salvia bowleyana GWHASIU00000002 6 CH_sbo_685 5 7 0.00043828
Salix brachista GWHAAZH00000018 6 CH_sbr_718 9 41 0.000982305
Simmondsia chinensis GWHAASQ00000025 6 CH_sci_423 5 6 0.000350089
Sequoiadendron giganteum chr4 6 CH_sgi_1150 7 8 0.000000259077
Sequoiadendron giganteum chr1 6 CH_sgi_1334 6 6 0.00000176658
Sequoiadendron giganteum chr5 6 CH_sgi_1390 7 10 0.00000376047
Sequoiadendron giganteum chr1 6 CH_sgi_1477 11 43 0.0000130387
Sequoiadendron giganteum chr6 6 CH_sgi_1931 5 6 0.0000946732
Sequoiadendron giganteum chr4 6 CH_sgi_519 19 72 0.00000000000242309
Selaginella moellendorffii scaffold_49 6 CH_smo_297 10 18 0.000406597
Selenicereus undatus Scaffold_33680 6 CH_sun_119 9 59 0.00000401364
Selenicereus undatus Scaffold_2055 6 CH_sun_159 8 53 0.0000474705
Trochodendron aralioides group11 6 CH_tar_734 5 5 0.000288451
Tarenaya hassleriana NW_010962392.1 6 CH_tha_14 19 44 5.20048e-18
Tarenaya hassleriana NW_010964923.1 6 CH_tha_180 5 5 0.0000411768
Tripterygium wilfordii NC_052253.1 6 CH_twi_377 6 11 0.0001236
Tripterygium wilfordii NC_052240.1 6 CH_twi_419 7 19 0.000173204
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_253 11 41 0.000000543114
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_368 5 5 0.0000199612
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_46 14 23 6.56086e-16
Vigna mungo CM024078.1 6 CH_vmu_211 12 48 0.000000973281
Vanilla planifolia CM028155.1 6 CH_vpl_653 7 15 0.000479985
Vanilla planifolia CM028150.1 6 CH_vpl_744 5 6 0.000996638
Zea mays 2 6 CH_zma_456 8 32 0.000353006

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001