Functional clusters

Information

  • Type InterPro
  • Description NIF system FeS cluster assembly, NifU, N-terminal

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_7 5 CH_amhyb_435 2 3 0.000757523
Lotus japonicus chr1 5 CH_lja_565 2 3 0.000643531
Malus domestica Chr13 5 CH_mdo_1299 2 2 0.000568817
Medicago truncatula chr3 5 CH_mtr_910 2 2 0.0000410863
Rhododendron simsii chr08 5 CH_rsi_783 2 2 0.000193592
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_753 2 3 0.00083625
Amaranthus hybridus AmaHy_arrow1_Scaffold_7 6 CH_amhyb_435 2 3 0.000757523
Lotus japonicus chr1 6 CH_lja_565 2 3 0.000643531
Malus domestica Chr13 6 CH_mdo_1299 2 2 0.000568817
Medicago truncatula chr3 6 CH_mtr_910 2 2 0.0000410863
Rhododendron simsii chr08 6 CH_rsi_783 2 2 0.000193592
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_753 2 3 0.00083625

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001