Functional clusters
Information
- Type InterPro
- Description Transmembrane protein TauE-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr7 | 5 | CH_acertr_388 | 3 | 3 | 0.00000213213 |
| Acer truncatum | chr1 | 5 | CH_acertr_56 | 6 | 10 | 0.000000000000014109 |
| Arabidopsis thaliana | Chr4 | 5 | CH_ath_552 | 2 | 2 | 0.000429738 |
| Amborella trichopoda | AmTr_v1.0_scaffold00109 | 5 | CH_atr_568 | 2 | 2 | 0.000476644 |
| Chara braunii | BFEA01000209 | 5 | CH_cbr_316 | 2 | 3 | 0.000647303 |
| Carya illinoinensis | Chr02 | 5 | CH_cil_492 | 3 | 4 | 0.0000083885 |
| Citrullus lanatus | CG_Chr11 | 5 | CH_cla_333 | 2 | 2 | 0.000532269 |
| Erigeron canadensis | Conyza_canadensis_scaffold:9 | 5 | CH_eca_682 | 2 | 2 | 0.000269233 |
| Fragaria vesca | Fvb6 | 5 | CH_fve_802 | 3 | 29 | 0.000663728 |
| Glycine max | Gm05 | 5 | CH_gma_443 | 3 | 3 | 0.00000332793 |
| Glycine max | Gm08 | 5 | CH_gma_444 | 3 | 3 | 0.00000332793 |
| Lotus japonicus | chr4 | 5 | CH_lja_263 | 3 | 3 | 0.00000168747 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 5 | CH_lsa_818 | 2 | 2 | 0.000514007 |
| Malus domestica | Chr09 | 5 | CH_mdo_553 | 3 | 3 | 0.00000061692 |
| Manihot esculenta | Chromosome04 | 5 | CH_mes_349 | 3 | 3 | 0.00000123051 |
| Physcomitrium patens | Chr20 | 5 | CH_ppa_294 | 2 | 2 | 0.000367636 |
| Prunus persica | Pp03 | 5 | CH_ppe_387 | 3 | 3 | 0.000000701166 |
| Papaver somniferum | NC_039365.1 | 5 | CH_pso_117 | 8 | 52 | 0.00000000000000108214 |
| Papaver somniferum | NC_039367.1 | 5 | CH_pso_127 | 8 | 58 | 0.00000000000000275316 |
| Populus trichocarpa | Chr01 | 5 | CH_ptr_524 | 3 | 8 | 0.0000462588 |
| Phaseolus vulgaris | Chr02 | 5 | CH_pvu_114 | 5 | 7 | 0.0000000000137765 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_467 | 5 | 50 | 0.0000000100684 |
| Sequoiadendron giganteum | chr10 | 5 | CH_sgi_2627 | 2 | 3 | 0.000876823 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 5 | CH_tpr_254 | 3 | 3 | 0.000000722019 |
| Acer truncatum | chr7 | 6 | CH_acertr_388 | 3 | 3 | 0.00000213213 |
| Acer truncatum | chr1 | 6 | CH_acertr_56 | 6 | 10 | 0.000000000000014109 |
| Arabidopsis thaliana | Chr4 | 6 | CH_ath_552 | 2 | 2 | 0.000429738 |
| Amborella trichopoda | AmTr_v1.0_scaffold00109 | 6 | CH_atr_568 | 2 | 2 | 0.000476644 |
| Chara braunii | BFEA01000209 | 6 | CH_cbr_316 | 2 | 3 | 0.000647303 |
| Carya illinoinensis | Chr02 | 6 | CH_cil_492 | 3 | 4 | 0.0000083885 |
| Citrullus lanatus | CG_Chr11 | 6 | CH_cla_333 | 2 | 2 | 0.000532269 |
| Erigeron canadensis | Conyza_canadensis_scaffold:9 | 6 | CH_eca_682 | 2 | 2 | 0.000269233 |
| Fragaria x ananassa | Fvb6-2 | 6 | CH_fan_1143 | 3 | 19 | 0.000660468 |
| Fragaria vesca | Fvb6 | 6 | CH_fve_802 | 3 | 29 | 0.000663728 |
| Glycine max | Gm05 | 6 | CH_gma_443 | 3 | 3 | 0.00000332793 |
| Glycine max | Gm08 | 6 | CH_gma_444 | 3 | 3 | 0.00000332793 |
| Lotus japonicus | chr4 | 6 | CH_lja_263 | 3 | 3 | 0.00000168747 |
| Lactuca sativa | Lsat_1_v8_lg_5 | 6 | CH_lsa_818 | 2 | 2 | 0.000514007 |
| Malus domestica | Chr09 | 6 | CH_mdo_553 | 3 | 3 | 0.00000061692 |
| Manihot esculenta | Chromosome04 | 6 | CH_mes_349 | 3 | 3 | 0.00000123051 |
| Physcomitrium patens | Chr20 | 6 | CH_ppa_294 | 2 | 2 | 0.000367636 |
| Prunus persica | Pp03 | 6 | CH_ppe_387 | 3 | 3 | 0.000000701166 |
| Papaver somniferum | NC_039365.1 | 6 | CH_pso_117 | 8 | 52 | 0.00000000000000108214 |
| Papaver somniferum | NC_039367.1 | 6 | CH_pso_127 | 8 | 58 | 0.00000000000000275316 |
| Populus trichocarpa | Chr01 | 6 | CH_ptr_524 | 3 | 8 | 0.0000462588 |
| Phaseolus vulgaris | Chr02 | 6 | CH_pvu_114 | 5 | 7 | 0.0000000000137765 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_467 | 5 | 50 | 0.0000000100684 |
| Sequoiadendron giganteum | chr10 | 6 | CH_sgi_2627 | 2 | 3 | 0.000876823 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 6 | CH_tpr_254 | 3 | 3 | 0.000000722019 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |