Functional clusters
Information
- Type InterPro
- Description Glycosyl transferase, family 31
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aquilegia oxysepala | CHR07 | 5 | CH_aox_295 | 3 | 4 | 0.0000314762 |
| Amborella trichopoda | AmTr_v1.0_scaffold00019 | 5 | CH_atr_302 | 3 | 3 | 0.00000772476 |
| Brassica carinata | ChrB06 | 5 | CH_bca_1617 | 3 | 5 | 0.000246453 |
| Camellia sinensis var. sinensis | Chr12 | 5 | CH_camsi_434 | 6 | 39 | 0.0000000284138 |
| Coffea canephora | chr5 | 5 | CH_ccan_717 | 2 | 2 | 0.000894371 |
| Citrus clementina | scaffold_3 | 5 | CH_ccl_758 | 3 | 8 | 0.000749573 |
| Olea europaea | chr11 | 5 | CH_oeu_249 | 3 | 3 | 0.0000111126 |
| Oryza sativa ssp. japonica | chr09 | 5 | CH_osa_418 | 3 | 3 | 0.0000188062 |
| Oryza sativa ssp. japonica | chr02 | 5 | CH_osa_527 | 3 | 4 | 0.0000751812 |
| Simmondsia chinensis | GWHAASQ00000012 | 5 | CH_sci_104 | 4 | 4 | 0.0000000234265 |
| Simmondsia chinensis | GWHAASQ00000004 | 5 | CH_sci_240 | 3 | 3 | 0.000025011 |
| Sequoiadendron giganteum | chr7 | 5 | CH_sgi_1458 | 3 | 3 | 0.0000104125 |
| Sequoiadendron giganteum | chr5 | 5 | CH_sgi_1459 | 3 | 3 | 0.0000104125 |
| Sequoiadendron giganteum | chr3 | 5 | CH_sgi_2509 | 3 | 8 | 0.000581753 |
| Vitis vinifera | chr1 | 5 | CH_vvi_397 | 5 | 31 | 0.00000337911 |
| Vitis vinifera | chr11 | 5 | CH_vvi_449 | 3 | 3 | 0.0000253852 |
| Aquilegia oxysepala | CHR07 | 6 | CH_aox_295 | 3 | 4 | 0.0000314762 |
| Amborella trichopoda | AmTr_v1.0_scaffold00019 | 6 | CH_atr_302 | 3 | 3 | 0.00000772476 |
| Brassica carinata | ChrB06 | 6 | CH_bca_1617 | 3 | 5 | 0.000246453 |
| Camellia sinensis var. sinensis | Chr12 | 6 | CH_camsi_434 | 6 | 39 | 0.0000000284138 |
| Coffea canephora | chr5 | 6 | CH_ccan_717 | 2 | 2 | 0.000894371 |
| Citrus clementina | scaffold_3 | 6 | CH_ccl_758 | 3 | 8 | 0.000749573 |
| Olea europaea | chr11 | 6 | CH_oeu_249 | 3 | 3 | 0.0000111126 |
| Oryza sativa ssp. japonica | chr09 | 6 | CH_osa_418 | 3 | 3 | 0.0000188062 |
| Oryza sativa ssp. japonica | chr02 | 6 | CH_osa_527 | 3 | 4 | 0.0000751812 |
| Simmondsia chinensis | GWHAASQ00000012 | 6 | CH_sci_104 | 4 | 4 | 0.0000000234265 |
| Simmondsia chinensis | GWHAASQ00000004 | 6 | CH_sci_240 | 3 | 3 | 0.000025011 |
| Sequoiadendron giganteum | chr7 | 6 | CH_sgi_1458 | 3 | 3 | 0.0000104125 |
| Sequoiadendron giganteum | chr5 | 6 | CH_sgi_1459 | 3 | 3 | 0.0000104125 |
| Sequoiadendron giganteum | chr3 | 6 | CH_sgi_2509 | 3 | 8 | 0.000581753 |
| Vitis vinifera | chr1 | 6 | CH_vvi_397 | 5 | 31 | 0.00000337911 |
| Vitis vinifera | chr11 | 6 | CH_vvi_449 | 3 | 3 | 0.0000253852 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |