Functional clusters

Information

  • Type InterPro
  • Description Patatin-like phospholipase domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr5 5 CH_acertr_378 3 3 0.0000016401
Actinidia chinensis Lachesis_group26 5 CH_ach_72 4 4 0.00000000608354
Arabidopsis lyrata scaffold_7 5 CH_aly_329 3 3 0.00000297347
Aquilegia oxysepala CHR06 5 CH_aox_27 10 60 0.00000000000000404608
Aquilegia oxysepala CHR04 5 CH_aox_314 3 4 0.0000780592
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 5 CH_arhy_745 3 3 0.00000804534
Arabidopsis thaliana Chr4 5 CH_ath_245 3 3 0.000000352118
Brassica carinata Contig886 5 CH_bca_838 3 3 0.0000020049
Camellia sinensis var. sinensis Chr4 5 CH_camsi_404 4 6 0.0000000132701
Cannabis sativa NC_044373.1 5 CH_cansat_25 10 34 7.38444e-21
Capsicum annuum PGAv.1.6.scaffold371 5 CH_can_392 3 3 0.00000225218
Coffea canephora chr8 5 CH_ccan_470 3 37 0.000105766
Carpinus fangiana Cfa08 5 CH_cfa_142 5 7 0.000000000174182
Carpinus fangiana Cfa07 5 CH_cfa_215 4 5 0.0000000576695
Carya illinoinensis Chr15 5 CH_cil_102 10 51 0.00000000000000349297
Carya illinoinensis Chr16 5 CH_cil_298 4 4 0.0000000374089
Carya illinoinensis Chr01 5 CH_cil_536 3 3 0.0000377187
Carya illinoinensis Chr09 5 CH_cil_630 3 4 0.000150758
Citrullus lanatus CG_Chr02 5 CH_cla_25 5 5 0.000000000000930165
Corchorus olitorius AWUE01019240.1 5 CH_col_87 3 3 0.00000448004
Cucumis sativus L. chr2 5 CH_csa_22 9 11 1.69859e-23
Davidia involucrata GWHABJS00000002 5 CH_din_30 9 15 1.91409e-21
Davidia involucrata GWHABJS00000011 5 CH_din_397 3 3 0.0000122915
Durio zibethinus NW_019167949.1 5 CH_dzi_214 4 8 0.000000312075
Durio zibethinus NW_019168481.1 5 CH_dzi_312 3 3 0.00000837824
Durio zibethinus NW_019167937.1 5 CH_dzi_358 3 4 0.0000334988
Erigeron canadensis Conyza_canadensis_scaffold:2 5 CH_eca_799 3 12 0.000642188
Eucalyptus grandis Chr09 5 CH_egr_876 5 22 0.00000247562
Fragaria vesca Fvb2 5 CH_fve_26 10 19 3.61018e-24
Fragaria vesca Fvb1 5 CH_fve_514 4 21 0.0000266476
Gossypium hirsutum A05 5 CH_ghi_163 6 6 0.00000000000000885456
Gossypium hirsutum D05 5 CH_ghi_247 5 5 0.0000000000132638
Glycine max Gm17 5 CH_gma_231 4 4 0.00000000389636
Glycine max Gm14 5 CH_gma_484 3 3 0.00000789627
Glycine max Gm07 5 CH_gma_540 3 4 0.0000315728
Gossypium raimondii Chr09 5 CH_gra_247 4 6 0.0000000876349
Helianthus annuus HanXRQChr04 5 CH_han_1036 3 6 0.000347554
Helianthus annuus HanXRQChr09 5 CH_han_733 3 3 0.0000174044
Helianthus annuus HanXRQChr09 5 CH_han_734 3 3 0.0000174044
Hydrangea macrophylla Hma1.2p1_0982F.1 5 CH_hma_75 4 6 0.0000000101759
Lotus japonicus chr1 5 CH_lja_380 3 6 0.0000438342
Lactuca sativa Lsat_1_v8_lg_1 5 CH_lsa_351 4 6 0.000000125004
Lactuca sativa Lsat_1_v8_lg_4 5 CH_lsa_443 5 35 0.00000164476
Lactuca sativa Lsat_1_v8_lg_7 5 CH_lsa_620 3 4 0.0000519067
Manihot esculenta Chromosome18 5 CH_mes_228 4 4 0.00000000209035
Marchantia polymorpha scaffold_106 5 CH_mpo_103 3 4 0.00000614602
Medicago truncatula chr8 5 CH_mtr_189 6 10 0.0000000000000214238
Nelumbo nucifera chr5 5 CH_nnu_137 4 6 0.00000000686212
Oryza sativa ssp. japonica chr08 5 CH_osa_345 3 3 0.00000234293
Punica granatum NC_045133.1 5 CH_pgr_51 6 6 4.28753e-16
Physcomitrium patens Chr11 5 CH_ppa_282 3 10 0.000306831
Prunus persica Pp07 5 CH_ppe_324 5 19 0.0000000705679
Prunus persica Pp01 5 CH_ppe_85 7 7 2.31543e-18
Pisum sativum chr4LG4 5 CH_psa_277 4 13 0.000000722729
Pisum sativum chr2LG1 5 CH_psa_477 3 6 0.0000554605
Papaver somniferum NC_039360.1 5 CH_pso_1009 3 7 0.000190045
Papaver somniferum NC_039358.1 5 CH_pso_416 4 6 0.0000000302947
Papaver somniferum NC_039362.1 5 CH_pso_936 3 6 0.000108629
Populus trichocarpa Chr19 5 CH_ptr_111 7 12 0.0000000000000356368
Populus trichocarpa Chr14 5 CH_ptr_92 7 8 3.61177e-16
Phaseolus vulgaris Chr10 5 CH_pvu_100 6 11 0.00000000000165674
Phaseolus vulgaris Chr01 5 CH_pvu_195 4 4 0.00000000870485
Quercus lobata 6 5 CH_qlo_203 9 30 3.17307e-18
Rosa chinensis RcHm_v2.0_Chr2 5 CH_rch_295 6 19 0.0000000000140878
Rosa chinensis RcHm_v2.0_Chr6 5 CH_rch_72 11 44 2.32111e-23
Rhododendron simsii chr08 5 CH_rsi_237 6 16 0.0000000000461633
Rhododendron simsii chr05 5 CH_rsi_744 3 5 0.000162218
Rhododendron simsii chr06 5 CH_rsi_745 3 5 0.000162218
Salix brachista GWHAAZH00000016 5 CH_sbr_411 3 3 0.0000217644
Sechium edule LG05 5 CH_sed_419 3 9 0.000291177
Sequoiadendron giganteum chr4 5 CH_sgi_262 7 9 1.31089e-17
Solanum lycopersicum SL4.0ch02 5 CH_sly_497 4 20 0.0000141486
Solanum pennellii Spenn-ch04 5 CH_spe_176 4 4 0.00000000127912
Solanum pennellii Spenn-ch08 5 CH_spe_399 3 3 0.00000338311
Selenicereus undatus Scaffold_33677 5 CH_sun_122 3 4 0.0000052261
Theobroma cacao Chromosome_1 5 CH_tca_492 4 22 0.0000331333
Theobroma cacao Chromosome_8 5 CH_tca_77 6 6 0.00000000000000128684
Tarenaya hassleriana NW_010966177.1 5 CH_tha_30 5 5 0.000000000000779878
Tripterygium wilfordii NC_052237.1 5 CH_twi_147 4 5 0.0000000190067
Tripterygium wilfordii NC_052245.1 5 CH_twi_320 3 4 0.0000287078
Tripterygium wilfordii NC_052242.1 5 CH_twi_56 5 5 0.00000000000190832
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_132 4 4 0.00000000438162
Vitis vinifera chr7 5 CH_vvi_283 4 5 0.000000135068
Vitis vinifera chr7 5 CH_vvi_322 4 6 0.000000404891
Zea mays 1 5 CH_zma_141 4 5 0.0000000212993
Zea mays 2 5 CH_zma_203 4 9 0.00000053581
Acer truncatum chr5 6 CH_acertr_378 3 3 0.0000016401
Actinidia chinensis Lachesis_group26 6 CH_ach_72 4 4 0.00000000608354
Arabidopsis lyrata scaffold_7 6 CH_aly_329 3 3 0.00000297347
Aquilegia oxysepala CHR06 6 CH_aox_27 10 60 0.00000000000000404608
Aquilegia oxysepala CHR04 6 CH_aox_314 3 4 0.0000780592
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 6 CH_arhy_745 3 3 0.00000804534
Arabidopsis thaliana Chr4 6 CH_ath_245 3 3 0.000000352118
Brassica carinata Contig886 6 CH_bca_838 3 3 0.0000020049
Camellia sinensis var. sinensis Chr4 6 CH_camsi_404 4 6 0.0000000132701
Cannabis sativa NC_044373.1 6 CH_cansat_25 10 34 7.38444e-21
Capsicum annuum PGAv.1.6.scaffold371 6 CH_can_392 3 3 0.00000225218
Coffea canephora chr8 6 CH_ccan_470 3 37 0.000105766
Carpinus fangiana Cfa08 6 CH_cfa_142 5 7 0.000000000174182
Carpinus fangiana Cfa07 6 CH_cfa_215 4 5 0.0000000576695
Carya illinoinensis Chr15 6 CH_cil_102 10 51 0.00000000000000349297
Carya illinoinensis Chr16 6 CH_cil_298 4 4 0.0000000374089
Carya illinoinensis Chr01 6 CH_cil_536 3 3 0.0000377187
Carya illinoinensis Chr09 6 CH_cil_630 3 4 0.000150758
Citrullus lanatus CG_Chr02 6 CH_cla_25 5 5 0.000000000000930165
Cucumis melo chr11 6 CH_cme_46 7 14 4.62478e-16
Corchorus olitorius AWUE01019240.1 6 CH_col_87 3 3 0.00000448004
Cucumis sativus L. chr2 6 CH_csa_22 9 11 1.69859e-23
Davidia involucrata GWHABJS00000002 6 CH_din_30 9 15 1.91409e-21
Davidia involucrata GWHABJS00000011 6 CH_din_397 3 3 0.0000122915
Durio zibethinus NW_019167949.1 6 CH_dzi_214 4 8 0.000000312075
Durio zibethinus NW_019168481.1 6 CH_dzi_312 3 3 0.00000837824
Durio zibethinus NW_019167937.1 6 CH_dzi_358 3 4 0.0000334988
Erigeron canadensis Conyza_canadensis_scaffold:2 6 CH_eca_799 3 12 0.000642188
Eucalyptus grandis Chr09 6 CH_egr_876 5 22 0.00000247562
Fragaria x ananassa Fvb2-1 6 CH_fan_129 5 6 0.0000000000111735
Fragaria x ananassa Fvb2-4 6 CH_fan_234 4 4 0.0000000043772
Fragaria x ananassa Fvb1-4 6 CH_fan_626 4 17 0.0000103705
Fragaria vesca Fvb2 6 CH_fve_26 10 19 3.61018e-24
Fragaria vesca Fvb1 6 CH_fve_514 4 21 0.0000266476
Gossypium hirsutum A05 6 CH_ghi_163 6 6 0.00000000000000885456
Gossypium hirsutum D05 6 CH_ghi_247 5 5 0.0000000000132638
Glycine max Gm17 6 CH_gma_231 4 4 0.00000000389636
Glycine max Gm14 6 CH_gma_484 3 3 0.00000789627
Glycine max Gm07 6 CH_gma_540 3 4 0.0000315728
Gossypium raimondii Chr09 6 CH_gra_247 4 6 0.0000000876349
Helianthus annuus HanXRQChr04 6 CH_han_1036 3 6 0.000347554
Helianthus annuus HanXRQChr09 6 CH_han_733 3 3 0.0000174044
Helianthus annuus HanXRQChr09 6 CH_han_734 3 3 0.0000174044
Hydrangea macrophylla Hma1.2p1_0982F.1 6 CH_hma_75 4 6 0.0000000101759
Lotus japonicus chr1 6 CH_lja_380 3 6 0.0000438342
Lactuca sativa Lsat_1_v8_lg_1 6 CH_lsa_351 4 6 0.000000125004
Lactuca sativa Lsat_1_v8_lg_4 6 CH_lsa_443 5 35 0.00000164476
Lactuca sativa Lsat_1_v8_lg_7 6 CH_lsa_620 3 4 0.0000519067
Manihot esculenta Chromosome18 6 CH_mes_228 4 4 0.00000000209035
Marchantia polymorpha scaffold_106 6 CH_mpo_103 3 4 0.00000614602
Medicago truncatula chr8 6 CH_mtr_189 6 10 0.0000000000000214238
Nelumbo nucifera chr5 6 CH_nnu_137 4 6 0.00000000686212
Oryza sativa ssp. japonica chr08 6 CH_osa_345 3 3 0.00000234293
Punica granatum NC_045133.1 6 CH_pgr_51 6 6 4.28753e-16
Physcomitrium patens Chr11 6 CH_ppa_282 3 10 0.000306831
Prunus persica Pp07 6 CH_ppe_324 5 19 0.0000000705679
Prunus persica Pp01 6 CH_ppe_85 7 7 2.31543e-18
Pisum sativum chr4LG4 6 CH_psa_277 4 13 0.000000722729
Pisum sativum chr2LG1 6 CH_psa_477 3 6 0.0000554605
Papaver somniferum NC_039360.1 6 CH_pso_1009 3 7 0.000190045
Papaver somniferum NC_039358.1 6 CH_pso_416 4 6 0.0000000302947
Papaver somniferum NC_039362.1 6 CH_pso_936 3 6 0.000108629
Populus trichocarpa Chr19 6 CH_ptr_111 7 12 0.0000000000000356368
Populus trichocarpa Chr14 6 CH_ptr_92 7 8 3.61177e-16
Phaseolus vulgaris Chr10 6 CH_pvu_100 6 11 0.00000000000165674
Phaseolus vulgaris Chr01 6 CH_pvu_195 4 4 0.00000000870485
Quercus lobata 6 6 CH_qlo_203 9 30 3.17307e-18
Rosa chinensis RcHm_v2.0_Chr2 6 CH_rch_295 6 19 0.0000000000140878
Rosa chinensis RcHm_v2.0_Chr6 6 CH_rch_72 11 44 2.32111e-23
Rhododendron simsii chr08 6 CH_rsi_237 6 16 0.0000000000461633
Rhododendron simsii chr05 6 CH_rsi_744 3 5 0.000162218
Rhododendron simsii chr06 6 CH_rsi_745 3 5 0.000162218
Salix brachista GWHAAZH00000016 6 CH_sbr_411 3 3 0.0000217644
Sechium edule LG05 6 CH_sed_419 3 9 0.000291177
Sequoiadendron giganteum chr4 6 CH_sgi_262 7 9 1.31089e-17
Solanum lycopersicum SL4.0ch02 6 CH_sly_497 4 20 0.0000141486
Solanum pennellii Spenn-ch04 6 CH_spe_176 4 4 0.00000000127912
Solanum pennellii Spenn-ch08 6 CH_spe_399 3 3 0.00000338311
Selenicereus undatus Scaffold_33677 6 CH_sun_122 3 4 0.0000052261
Theobroma cacao Chromosome_1 6 CH_tca_492 4 22 0.0000331333
Theobroma cacao Chromosome_8 6 CH_tca_77 6 6 0.00000000000000128684
Tarenaya hassleriana NW_010966177.1 6 CH_tha_30 5 5 0.000000000000779878
Tripterygium wilfordii NC_052237.1 6 CH_twi_147 4 5 0.0000000190067
Tripterygium wilfordii NC_052245.1 6 CH_twi_320 3 4 0.0000287078
Tripterygium wilfordii NC_052242.1 6 CH_twi_56 5 5 0.00000000000190832
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_132 4 4 0.00000000438162
Vitis vinifera chr7 6 CH_vvi_283 4 5 0.000000135068
Vitis vinifera chr7 6 CH_vvi_322 4 6 0.000000404891
Zea mays 1 6 CH_zma_141 4 5 0.0000000212993
Zea mays 2 6 CH_zma_203 4 9 0.00000053581

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001