Functional clusters
Information
- Type InterPro
- Description Peptidase S54, rhomboid
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00012 | 5 | CH_atr_633 | 2 | 2 | 0.000794407 |
| Brassica carinata | ChrC02 | 5 | CH_bca_1020 | 3 | 4 | 0.00000801796 |
| Malus domestica | Chr11 | 5 | CH_mdo_14 | 15 | 79 | 4.17901e-31 |
| Medicago truncatula | chr2 | 5 | CH_mtr_737 | 3 | 4 | 0.00000222796 |
| Petunia axillaris | Peaxi162Scf00040 | 5 | CH_pax_296 | 3 | 5 | 0.00000415669 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_606 | 3 | 3 | 0.000000200248 |
| Selenicereus undatus | Scaffold_33678 | 5 | CH_sun_42 | 4 | 7 | 0.00000000140961 |
| Amborella trichopoda | AmTr_v1.0_scaffold00012 | 6 | CH_atr_633 | 2 | 2 | 0.000794407 |
| Brassica carinata | ChrC02 | 6 | CH_bca_1020 | 3 | 4 | 0.00000801796 |
| Fragaria x ananassa | Fvb6-3 | 6 | CH_fan_928 | 3 | 10 | 0.000224896 |
| Malus domestica | Chr11 | 6 | CH_mdo_14 | 15 | 79 | 4.17901e-31 |
| Medicago truncatula | chr2 | 6 | CH_mtr_737 | 3 | 4 | 0.00000222796 |
| Petunia axillaris | Peaxi162Scf00040 | 6 | CH_pax_296 | 3 | 5 | 0.00000415669 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_606 | 3 | 3 | 0.000000200248 |
| Selenicereus undatus | Scaffold_33678 | 6 | CH_sun_42 | 4 | 7 | 0.00000000140961 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |