Functional clusters
Information
- Type InterPro
- Description 3'-5' exonuclease domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr2 | 5 | CH_acertr_22 | 9 | 18 | 5.47742e-20 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_13 | 5 | CH_amhyb_135 | 3 | 3 | 0.00000127543 |
| Aquilegia oxysepala | CHR02 | 5 | CH_aox_5 | 9 | 13 | 8.61989e-22 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.13 | 5 | CH_arhy_296 | 5 | 10 | 0.0000000000399424 |
| Beta vulgaris | Chr3_EL10_PGA_scaffold7 | 5 | CH_bvu_309 | 3 | 5 | 0.0000293862 |
| Capsicum annuum | PGAv.1.6.scaffold220 | 5 | CH_can_118 | 6 | 8 | 0.000000000000244473 |
| Capsicum annuum | PGAv.1.6.scaffold809 | 5 | CH_can_738 | 3 | 6 | 0.000361882 |
| Cicer arietinum L. | Ca_LG3_v3 | 5 | CH_car_164 | 3 | 4 | 0.0000203456 |
| Carpinus fangiana | Cfa06 | 5 | CH_cfa_307 | 3 | 3 | 0.00000313183 |
| Cardamine hirsuta | Chr3 | 5 | CH_chi_395 | 3 | 4 | 0.0000081963 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4257 | 5 | CH_cqu_798 | 3 | 6 | 0.000245752 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4077 | 5 | CH_cqu_799 | 3 | 6 | 0.000245752 |
| Cucumis sativus L. | chr3 | 5 | CH_csa_259 | 3 | 4 | 0.00000501603 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 5 | CH_eca_81 | 5 | 6 | 0.00000000000156295 |
| Erythranthe guttata | scaffold_5 | 5 | CH_egut_397 | 5 | 38 | 0.00000680956 |
| Glycine max | Gm18 | 5 | CH_gma_458 | 3 | 3 | 0.00000437385 |
| Helianthus annuus | HanXRQChr15 | 5 | CH_han_291 | 4 | 4 | 0.00000000083878 |
| Lactuca sativa | Lsat_1_v8_lg_9 | 5 | CH_lsa_99 | 6 | 9 | 0.0000000000000083878 |
| Nelumbo nucifera | chr4 | 5 | CH_nnu_115 | 4 | 4 | 0.00000000102603 |
| Petunia axillaris | Peaxi162Scf00357 | 5 | CH_pax_128 | 4 | 4 | 0.00000000625357 |
| Punica granatum | NC_045133.1 | 5 | CH_pgr_290 | 3 | 3 | 0.00000185808 |
| Pisum sativum | chr3LG5 | 5 | CH_psa_501 | 3 | 10 | 0.000107603 |
| Papaver somniferum | NC_039363.1 | 5 | CH_pso_734 | 3 | 3 | 0.0000123456 |
| Papaver somniferum | NW_020624377.1 | 5 | CH_pso_850 | 3 | 4 | 0.0000493634 |
| Rhododendron simsii | chr04 | 5 | CH_rsi_645 | 3 | 5 | 0.0000509313 |
| Salvia bowleyana | GWHASIU00000002 | 5 | CH_sbo_208 | 4 | 5 | 0.000000000466172 |
| Trochodendron aralioides | group7 | 5 | CH_tar_448 | 3 | 4 | 0.0000246446 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_74 | 5 | CH_tpr_79 | 5 | 7 | 0.0000000000155221 |
| Acer truncatum | chr2 | 6 | CH_acertr_22 | 9 | 18 | 5.47742e-20 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_13 | 6 | CH_amhyb_135 | 3 | 3 | 0.00000127543 |
| Aquilegia oxysepala | CHR02 | 6 | CH_aox_5 | 9 | 13 | 8.61989e-22 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.13 | 6 | CH_arhy_296 | 5 | 10 | 0.0000000000399424 |
| Beta vulgaris | Chr3_EL10_PGA_scaffold7 | 6 | CH_bvu_309 | 3 | 5 | 0.0000293862 |
| Capsicum annuum | PGAv.1.6.scaffold220 | 6 | CH_can_118 | 6 | 8 | 0.000000000000244473 |
| Capsicum annuum | PGAv.1.6.scaffold809 | 6 | CH_can_738 | 3 | 6 | 0.000361882 |
| Cicer arietinum L. | Ca_LG3_v3 | 6 | CH_car_164 | 3 | 4 | 0.0000203456 |
| Carpinus fangiana | Cfa06 | 6 | CH_cfa_307 | 3 | 3 | 0.00000313183 |
| Cardamine hirsuta | Chr3 | 6 | CH_chi_395 | 3 | 4 | 0.0000081963 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4257 | 6 | CH_cqu_798 | 3 | 6 | 0.000245752 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4077 | 6 | CH_cqu_799 | 3 | 6 | 0.000245752 |
| Cucumis sativus L. | chr3 | 6 | CH_csa_259 | 3 | 4 | 0.00000501603 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 6 | CH_eca_81 | 5 | 6 | 0.00000000000156295 |
| Erythranthe guttata | scaffold_5 | 6 | CH_egut_397 | 5 | 38 | 0.00000680956 |
| Glycine max | Gm18 | 6 | CH_gma_458 | 3 | 3 | 0.00000437385 |
| Helianthus annuus | HanXRQChr15 | 6 | CH_han_291 | 4 | 4 | 0.00000000083878 |
| Lactuca sativa | Lsat_1_v8_lg_9 | 6 | CH_lsa_99 | 6 | 9 | 0.0000000000000083878 |
| Nelumbo nucifera | chr4 | 6 | CH_nnu_115 | 4 | 4 | 0.00000000102603 |
| Petunia axillaris | Peaxi162Scf00357 | 6 | CH_pax_128 | 4 | 4 | 0.00000000625357 |
| Punica granatum | NC_045133.1 | 6 | CH_pgr_290 | 3 | 3 | 0.00000185808 |
| Pisum sativum | chr3LG5 | 6 | CH_psa_501 | 3 | 10 | 0.000107603 |
| Papaver somniferum | NC_039363.1 | 6 | CH_pso_734 | 3 | 3 | 0.0000123456 |
| Papaver somniferum | NW_020624377.1 | 6 | CH_pso_850 | 3 | 4 | 0.0000493634 |
| Rhododendron simsii | chr04 | 6 | CH_rsi_645 | 3 | 5 | 0.0000509313 |
| Salvia bowleyana | GWHASIU00000002 | 6 | CH_sbo_208 | 4 | 5 | 0.000000000466172 |
| Trochodendron aralioides | group7 | 6 | CH_tar_448 | 3 | 4 | 0.0000246446 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_74 | 6 | CH_tpr_79 | 5 | 7 | 0.0000000000155221 |
Available child term results
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |