Functional clusters
Information
- Type InterPro
- Description Alpha tubulin
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis lyrata | scaffold_6 | 5 | CH_aly_714 | 2 | 2 | 0.000990066 |
Arabidopsis thaliana | Chr5 | 5 | CH_ath_541 | 2 | 2 | 0.000429738 |
Brassica carinata | ChrB08 | 5 | CH_bca_1042 | 3 | 6 | 0.00000931848 |
Brassica carinata | ChrC04 | 5 | CH_bca_829 | 3 | 4 | 0.00000186415 |
Brassica napus | C09 | 5 | CH_bna_959 | 3 | 7 | 0.000041576 |
Camellia sinensis var. sinensis | Chr1 | 5 | CH_camsi_652 | 3 | 3 | 0.00000114808 |
Capsella rubella | scaffold_6 | 5 | CH_cru_575 | 2 | 2 | 0.000438693 |
Durio zibethinus | NW_019168492.1 | 5 | CH_dzi_164 | 4 | 5 | 0.0000000173573 |
Eutrema salsugineum | scaffold_2 | 5 | CH_esa_500 | 2 | 2 | 0.000761499 |
Petunia axillaris | Peaxi162Scf00060 | 5 | CH_pax_199 | 3 | 3 | 0.000000148503 |
Salvia bowleyana | GWHASIU00000001 | 5 | CH_sbo_295 | 4 | 16 | 0.000000107828 |
Selaginella moellendorffii | scaffold_44 | 5 | CH_smo_186 | 3 | 3 | 0.0000340021 |
Arabidopsis lyrata | scaffold_6 | 6 | CH_aly_714 | 2 | 2 | 0.000990066 |
Arabidopsis thaliana | Chr5 | 6 | CH_ath_541 | 2 | 2 | 0.000429738 |
Brassica carinata | ChrB08 | 6 | CH_bca_1042 | 3 | 6 | 0.00000931848 |
Brassica carinata | ChrC04 | 6 | CH_bca_829 | 3 | 4 | 0.00000186415 |
Brassica napus | C09 | 6 | CH_bna_959 | 3 | 7 | 0.000041576 |
Camellia sinensis var. sinensis | Chr1 | 6 | CH_camsi_652 | 3 | 3 | 0.00000114808 |
Capsella rubella | scaffold_6 | 6 | CH_cru_575 | 2 | 2 | 0.000438693 |
Durio zibethinus | NW_019168492.1 | 6 | CH_dzi_164 | 4 | 5 | 0.0000000173573 |
Eutrema salsugineum | scaffold_2 | 6 | CH_esa_500 | 2 | 2 | 0.000761499 |
Petunia axillaris | Peaxi162Scf00060 | 6 | CH_pax_199 | 3 | 3 | 0.000000148503 |
Salvia bowleyana | GWHASIU00000001 | 6 | CH_sbo_295 | 4 | 16 | 0.000000107828 |
Selaginella moellendorffii | scaffold_44 | 6 | CH_smo_186 | 3 | 3 | 0.0000340021 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |