Functional clusters
Information
- Type InterPro
- Description Venom allergen 5-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr7 | 5 | CH_acertr_972 | 2 | 2 | 0.00070497 |
| Arabidopsis lyrata | scaffold_3 | 5 | CH_aly_220 | 4 | 8 | 0.0000000823288 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_1 | 5 | CH_amhyb_28 | 5 | 6 | 0.000000000000126526 |
| Aquilegia oxysepala | CHR07 | 5 | CH_aox_405 | 2 | 2 | 0.000240597 |
| Amborella trichopoda | AmTr_v1.0_scaffold00012 | 5 | CH_atr_132 | 4 | 4 | 0.00000000150569 |
| Amborella trichopoda | AmTr_v1.0_scaffold00019 | 5 | CH_atr_69 | 5 | 5 | 0.000000000000598139 |
| Brassica carinata | ChrC09 | 5 | CH_bca_810 | 3 | 3 | 0.0000015765 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 5 | CH_bvu_231 | 3 | 3 | 0.000000863699 |
| Cicer arietinum L. | Ca_LG7_v3 | 5 | CH_car_340 | 2 | 2 | 0.000466981 |
| Chara braunii | BFEA01000031 | 5 | CH_cbr_63 | 4 | 17 | 0.0000000132747 |
| Coffea canephora | chr6 | 5 | CH_ccan_504 | 2 | 4 | 0.000153319 |
| Citrus clementina | scaffold_1 | 5 | CH_ccl_698 | 2 | 2 | 0.000492187 |
| Citrullus lanatus | CG_Chr10 | 5 | CH_cla_328 | 2 | 2 | 0.000532269 |
| Citrullus lanatus | CG_Chr06 | 5 | CH_cla_329 | 2 | 2 | 0.000532269 |
| Carica papaya | supercontig_95 | 5 | CH_cpa_470 | 2 | 2 | 0.000285198 |
| Capsella rubella | scaffold_7 | 5 | CH_cru_335 | 3 | 3 | 0.00000364869 |
| Cucumis sativus L. | chr1 | 5 | CH_csa_483 | 2 | 2 | 0.000834759 |
| Daucus carota | DCARv2_Chr5 | 5 | CH_dca_589 | 2 | 2 | 0.000382665 |
| Davidia involucrata | GWHABJS00000002 | 5 | CH_din_448 | 2 | 2 | 0.0000500125 |
| Eucalyptus grandis | Chr03 | 5 | CH_egr_514 | 5 | 19 | 0.000000000471688 |
| Gossypium hirsutum | A08 | 5 | CH_ghi_1243 | 2 | 2 | 0.000747644 |
| Gossypium hirsutum | D08 | 5 | CH_ghi_1244 | 2 | 2 | 0.000747644 |
| Glycine max | Gm17 | 5 | CH_gma_854 | 2 | 2 | 0.000569336 |
| Gossypium raimondii | Chr04 | 5 | CH_gra_612 | 2 | 2 | 0.000536107 |
| Lupinus albus | Lalb_Chr07 | 5 | CH_lal_746 | 2 | 2 | 0.000787236 |
| Lotus japonicus | chr4 | 5 | CH_lja_563 | 2 | 3 | 0.000643531 |
| Lonicera japonica | GWHAAZE00000009 | 5 | CH_lonja_1029 | 2 | 2 | 0.000359324 |
| Manihot esculenta | Chromosome06 | 5 | CH_mes_457 | 3 | 9 | 0.0000262876 |
| Marchantia polymorpha | scaffold_4 | 5 | CH_mpo_137 | 3 | 4 | 0.0000972635 |
| Marchantia polymorpha | scaffold_97 | 5 | CH_mpo_9 | 8 | 11 | 2.1178e-18 |
| Nelumbo nucifera | chr8 | 5 | CH_nnu_339 | 3 | 16 | 0.0000194749 |
| Punica granatum | NC_045129.1 | 5 | CH_pgr_602 | 2 | 2 | 0.000750356 |
| Papaver somniferum | NC_039363.1 | 5 | CH_pso_478 | 4 | 12 | 0.000000124051 |
| Quercus lobata | CM012294 | 5 | CH_qlo_1764 | 2 | 2 | 0.000774433 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 5 | CH_rch_1375 | 2 | 2 | 0.000597979 |
| Rhododendron simsii | chr06 | 5 | CH_rsi_475 | 3 | 3 | 0.000000749582 |
| Salix brachista | GWHAAZH00000018 | 5 | CH_sbr_687 | 2 | 2 | 0.000945209 |
| Simmondsia chinensis | GWHAASQ00000014 | 5 | CH_sci_177 | 3 | 3 | 0.00000130492 |
| Simmondsia chinensis | GWHAASQ00000014 | 5 | CH_sci_88 | 4 | 6 | 0.00000000583061 |
| Solanum lycopersicum | SL4.0ch07 | 5 | CH_sly_872 | 2 | 2 | 0.000586941 |
| Solanum pennellii | Spenn-ch07 | 5 | CH_spe_782 | 2 | 2 | 0.00044479 |
| Trochodendron aralioides | group4 | 5 | CH_tar_253 | 3 | 3 | 0.000000108135 |
| Theobroma cacao | Chromosome_9 | 5 | CH_tca_674 | 2 | 2 | 0.000439432 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 5 | CH_tpr_747 | 2 | 2 | 0.000756974 |
| Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 5 | CH_vma_671 | 2 | 2 | 0.000557543 |
| Vigna mungo | CM024074.1 | 5 | CH_vmu_501 | 2 | 2 | 0.000387685 |
| Acer truncatum | chr7 | 6 | CH_acertr_972 | 2 | 2 | 0.00070497 |
| Arabidopsis lyrata | scaffold_3 | 6 | CH_aly_220 | 4 | 8 | 0.0000000823288 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_1 | 6 | CH_amhyb_28 | 5 | 6 | 0.000000000000126526 |
| Aquilegia oxysepala | CHR07 | 6 | CH_aox_405 | 2 | 2 | 0.000240597 |
| Amborella trichopoda | AmTr_v1.0_scaffold00012 | 6 | CH_atr_132 | 4 | 4 | 0.00000000150569 |
| Amborella trichopoda | AmTr_v1.0_scaffold00019 | 6 | CH_atr_69 | 5 | 5 | 0.000000000000598139 |
| Brassica carinata | ChrC09 | 6 | CH_bca_810 | 3 | 3 | 0.0000015765 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 6 | CH_bvu_231 | 3 | 3 | 0.000000863699 |
| Cicer arietinum L. | Ca_LG7_v3 | 6 | CH_car_340 | 2 | 2 | 0.000466981 |
| Chara braunii | BFEA01000031 | 6 | CH_cbr_63 | 4 | 17 | 0.0000000132747 |
| Coffea canephora | chr6 | 6 | CH_ccan_504 | 2 | 4 | 0.000153319 |
| Citrus clementina | scaffold_1 | 6 | CH_ccl_698 | 2 | 2 | 0.000492187 |
| Citrullus lanatus | CG_Chr10 | 6 | CH_cla_328 | 2 | 2 | 0.000532269 |
| Citrullus lanatus | CG_Chr06 | 6 | CH_cla_329 | 2 | 2 | 0.000532269 |
| Carica papaya | supercontig_95 | 6 | CH_cpa_470 | 2 | 2 | 0.000285198 |
| Capsella rubella | scaffold_7 | 6 | CH_cru_335 | 3 | 3 | 0.00000364869 |
| Cucumis sativus L. | chr1 | 6 | CH_csa_483 | 2 | 2 | 0.000834759 |
| Daucus carota | DCARv2_Chr5 | 6 | CH_dca_589 | 2 | 2 | 0.000382665 |
| Davidia involucrata | GWHABJS00000002 | 6 | CH_din_448 | 2 | 2 | 0.0000500125 |
| Eucalyptus grandis | Chr03 | 6 | CH_egr_514 | 5 | 19 | 0.000000000471688 |
| Fragaria x ananassa | Fvb4-3 | 6 | CH_fan_1235 | 2 | 2 | 0.000832663 |
| Fragaria x ananassa | Fvb4-3 | 6 | CH_fan_1236 | 2 | 2 | 0.000832663 |
| Fragaria x ananassa | Fvb4-1 | 6 | CH_fan_1237 | 2 | 2 | 0.000832663 |
| Gossypium hirsutum | A08 | 6 | CH_ghi_1243 | 2 | 2 | 0.000747644 |
| Gossypium hirsutum | D08 | 6 | CH_ghi_1244 | 2 | 2 | 0.000747644 |
| Glycine max | Gm17 | 6 | CH_gma_854 | 2 | 2 | 0.000569336 |
| Gossypium raimondii | Chr04 | 6 | CH_gra_612 | 2 | 2 | 0.000536107 |
| Lupinus albus | Lalb_Chr07 | 6 | CH_lal_746 | 2 | 2 | 0.000787236 |
| Lotus japonicus | chr4 | 6 | CH_lja_563 | 2 | 3 | 0.000643531 |
| Lonicera japonica | GWHAAZE00000009 | 6 | CH_lonja_1029 | 2 | 2 | 0.000359324 |
| Manihot esculenta | Chromosome06 | 6 | CH_mes_457 | 3 | 9 | 0.0000262876 |
| Marchantia polymorpha | scaffold_4 | 6 | CH_mpo_137 | 3 | 4 | 0.0000972635 |
| Marchantia polymorpha | scaffold_97 | 6 | CH_mpo_9 | 8 | 11 | 2.1178e-18 |
| Nelumbo nucifera | chr8 | 6 | CH_nnu_339 | 3 | 16 | 0.0000194749 |
| Punica granatum | NC_045129.1 | 6 | CH_pgr_602 | 2 | 2 | 0.000750356 |
| Papaver somniferum | NC_039363.1 | 6 | CH_pso_478 | 4 | 12 | 0.000000124051 |
| Quercus lobata | CM012294 | 6 | CH_qlo_1764 | 2 | 2 | 0.000774433 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 6 | CH_rch_1375 | 2 | 2 | 0.000597979 |
| Rhododendron simsii | chr06 | 6 | CH_rsi_475 | 3 | 3 | 0.000000749582 |
| Salix brachista | GWHAAZH00000018 | 6 | CH_sbr_687 | 2 | 2 | 0.000945209 |
| Simmondsia chinensis | GWHAASQ00000014 | 6 | CH_sci_177 | 3 | 3 | 0.00000130492 |
| Simmondsia chinensis | GWHAASQ00000014 | 6 | CH_sci_88 | 4 | 6 | 0.00000000583061 |
| Solanum lycopersicum | SL4.0ch07 | 6 | CH_sly_872 | 2 | 2 | 0.000586941 |
| Solanum pennellii | Spenn-ch07 | 6 | CH_spe_782 | 2 | 2 | 0.00044479 |
| Trochodendron aralioides | group4 | 6 | CH_tar_253 | 3 | 3 | 0.000000108135 |
| Theobroma cacao | Chromosome_9 | 6 | CH_tca_674 | 2 | 2 | 0.000439432 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 6 | CH_tpr_747 | 2 | 2 | 0.000756974 |
| Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 6 | CH_vma_671 | 2 | 2 | 0.000557543 |
| Vigna mungo | CM024074.1 | 6 | CH_vmu_501 | 2 | 2 | 0.000387685 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |