Functional clusters

Information

  • Type InterPro
  • Description Phenylalanyl-tRNA synthetase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00090 5 CH_atr_567 2 2 0.000476644
Brassica carinata ChrC08 5 CH_bca_629 3 3 0.000000311873
Cardamine hirsuta Chr4 5 CH_chi_311 3 4 0.000000573272
Carya illinoinensis Chr01 5 CH_cil_468 3 9 0.00000483866
Daucus carota DCARv2_Chr2 5 CH_dca_507 2 2 0.000191333
Davidia involucrata GWHABJS00000012 5 CH_din_543 2 2 0.000150038
Quercus lobata 11 5 CH_qlo_1666 3 43 0.000492172
Amborella trichopoda AmTr_v1.0_scaffold00090 6 CH_atr_567 2 2 0.000476644
Brassica carinata ChrC08 6 CH_bca_629 3 3 0.000000311873
Cardamine hirsuta Chr4 6 CH_chi_311 3 4 0.000000573272
Carya illinoinensis Chr01 6 CH_cil_468 3 9 0.00000483866
Daucus carota DCARv2_Chr2 6 CH_dca_507 2 2 0.000191333
Davidia involucrata GWHABJS00000012 6 CH_din_543 2 2 0.000150038
Quercus lobata 11 6 CH_qlo_1666 3 43 0.000492172

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001