Functional clusters
Information
- Type InterPro
- Description Leucine-tRNA ligase
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis lyrata | scaffold_6 | 5 | CH_aly_430 | 2 | 2 | 0.0000660044 |
Amborella trichopoda | AmTr_v1.0_scaffold00106 | 5 | CH_atr_184 | 3 | 4 | 0.000000037865 |
Brassica napus | A03 | 5 | CH_bna_1264 | 2 | 4 | 0.000334099 |
Capsicum annuum | PGAv.1.6.scaffold1014 | 5 | CH_can_554 | 2 | 2 | 0.0000826105 |
Chara braunii | BFEA01000064 | 5 | CH_cbr_167 | 2 | 2 | 0.0000719269 |
Ceratophyllum demersum | 2 | 5 | CH_cde_203 | 2 | 2 | 0.0000789796 |
Hydrangea macrophylla | Hma1.2p1_0298F.1 | 5 | CH_hma_315 | 2 | 2 | 0.000111086 |
Lonicera japonica | GWHAAZE00000001 | 5 | CH_lonja_874 | 2 | 3 | 0.000179657 |
Malus domestica | Chr05 | 5 | CH_mdo_948 | 2 | 2 | 0.000113763 |
Sequoiadendron giganteum | chr3 | 5 | CH_sgi_775 | 3 | 3 | 0.00000000355983 |
Arabidopsis lyrata | scaffold_6 | 6 | CH_aly_430 | 2 | 2 | 0.0000660044 |
Amborella trichopoda | AmTr_v1.0_scaffold00106 | 6 | CH_atr_184 | 3 | 4 | 0.000000037865 |
Brassica napus | A03 | 6 | CH_bna_1264 | 2 | 4 | 0.000334099 |
Capsicum annuum | PGAv.1.6.scaffold1014 | 6 | CH_can_554 | 2 | 2 | 0.0000826105 |
Chara braunii | BFEA01000064 | 6 | CH_cbr_167 | 2 | 2 | 0.0000719269 |
Ceratophyllum demersum | 2 | 6 | CH_cde_203 | 2 | 2 | 0.0000789796 |
Hydrangea macrophylla | Hma1.2p1_0298F.1 | 6 | CH_hma_315 | 2 | 2 | 0.000111086 |
Lonicera japonica | GWHAAZE00000001 | 6 | CH_lonja_874 | 2 | 3 | 0.000179657 |
Malus domestica | Chr05 | 6 | CH_mdo_948 | 2 | 2 | 0.000113763 |
Sequoiadendron giganteum | chr3 | 6 | CH_sgi_775 | 3 | 3 | 0.00000000355983 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |