Functional clusters

Information

  • Type InterPro
  • Description Leucine-tRNA ligase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_6 5 CH_aly_430 2 2 0.0000660044
Amborella trichopoda AmTr_v1.0_scaffold00106 5 CH_atr_184 3 4 0.000000037865
Brassica napus A03 5 CH_bna_1264 2 4 0.000334099
Capsicum annuum PGAv.1.6.scaffold1014 5 CH_can_554 2 2 0.0000826105
Chara braunii BFEA01000064 5 CH_cbr_167 2 2 0.0000719269
Ceratophyllum demersum 2 5 CH_cde_203 2 2 0.0000789796
Hydrangea macrophylla Hma1.2p1_0298F.1 5 CH_hma_315 2 2 0.000111086
Lonicera japonica GWHAAZE00000001 5 CH_lonja_874 2 3 0.000179657
Malus domestica Chr05 5 CH_mdo_948 2 2 0.000113763
Sequoiadendron giganteum chr3 5 CH_sgi_775 3 3 0.00000000355983
Arabidopsis lyrata scaffold_6 6 CH_aly_430 2 2 0.0000660044
Amborella trichopoda AmTr_v1.0_scaffold00106 6 CH_atr_184 3 4 0.000000037865
Brassica napus A03 6 CH_bna_1264 2 4 0.000334099
Capsicum annuum PGAv.1.6.scaffold1014 6 CH_can_554 2 2 0.0000826105
Chara braunii BFEA01000064 6 CH_cbr_167 2 2 0.0000719269
Ceratophyllum demersum 2 6 CH_cde_203 2 2 0.0000789796
Hydrangea macrophylla Hma1.2p1_0298F.1 6 CH_hma_315 2 2 0.000111086
Lonicera japonica GWHAAZE00000001 6 CH_lonja_874 2 3 0.000179657
Malus domestica Chr05 6 CH_mdo_948 2 2 0.000113763
Sequoiadendron giganteum chr3 6 CH_sgi_775 3 3 0.00000000355983

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001