Functional clusters

Information

  • Type InterPro
  • Description Aminoacyl-tRNA synthetase, class Ia

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Coffea canephora chr3 5 CH_ccan_569 2 3 0.000268309
Erigeron canadensis Conyza_canadensis_scaffold:5 5 CH_eca_456 3 6 0.0000132826
Helianthus annuus HanXRQChr13 5 CH_han_515 3 3 0.000000492789
Lonicera japonica GWHAAZE00000006 5 CH_lonja_594 3 5 0.00000451764
Trifolium pratense Tp57577_TGAC_v2_LG5 5 CH_tpr_139 4 7 0.00000000318692
Coffea canephora chr3 6 CH_ccan_569 2 3 0.000268309
Erigeron canadensis Conyza_canadensis_scaffold:5 6 CH_eca_456 3 6 0.0000132826
Helianthus annuus HanXRQChr13 6 CH_han_515 3 3 0.000000492789
Lonicera japonica GWHAAZE00000006 6 CH_lonja_594 3 5 0.00000451764
Trifolium pratense Tp57577_TGAC_v2_LG5 6 CH_tpr_139 4 7 0.00000000318692

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001