Functional clusters

Information

  • Type InterPro
  • Description Equilibrative nucleoside transporter

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr10 5 CH_acertr_336 3 3 0.00000041748
Arabidopsis lyrata scaffold_6 5 CH_aly_237 3 3 0.000000228728
Amaranthus hybridus AmaHy_arrow1_Scaffold_3 5 CH_amhyb_453 2 2 0.000841751
Arabidopsis thaliana Chr4 5 CH_ath_172 4 16 0.00000000898117
Brassica carinata ChrB01 5 CH_bca_137 5 8 0.00000000000075116
Brassica napus C09 5 CH_bna_221 4 4 0.000000000242702
Brassica napus A09 5 CH_bna_369 4 8 0.0000000169779
Brassica oleracea C9 5 CH_bol_345 3 4 0.00000141011
Brassica rapa A09 5 CH_bra_77 4 4 0.000000000117511
Beta vulgaris Chr6_EL10_PGA_scaffold0 5 CH_bvu_208 3 4 0.000000411243
Camellia sinensis var. sinensis Chr10 5 CH_camsi_1130 3 9 0.000179875
Camellia sinensis var. sinensis Chr8 5 CH_camsi_264 5 11 0.0000000000946657
Camellia sinensis var. sinensis Chr8 5 CH_camsi_687 3 3 0.00000214476
Coffea canephora chr2 5 CH_ccan_278 3 37 0.00000739694
Citrus clementina scaffold_2 5 CH_ccl_768 2 2 0.000820311
Cardamine hirsuta Chr2 5 CH_chi_236 4 9 0.0000000411505
Cardamine hirsuta Chr8 5 CH_chi_90 5 5 0.0000000000000791078
Chenopodium quinoa C_Quinoa_Scaffold_3035 5 CH_cqu_398 3 3 0.00000074089
Chenopodium quinoa C_Quinoa_Scaffold_2715 5 CH_cqu_482 3 4 0.00000296301
Capsella rubella scaffold_6 5 CH_cru_296 3 3 0.000000962292
Eucalyptus grandis Chr04 5 CH_egr_491 4 5 0.0000000002105
Eutrema salsugineum scaffold_3 5 CH_esa_186 3 3 0.000000304449
Fragaria vesca Fvb3 5 CH_fve_827 2 2 0.000883652
Helianthus annuus HanXRQChr12 5 CH_han_550 3 3 0.00000125437
Lotus japonicus chr6 5 CH_lja_223 3 3 0.000000429537
Magnolia biondii Chr11 5 CH_mbi_126 5 5 0.0000000000000835451
Magnolia biondii Chr18 5 CH_mbi_656 3 5 0.0000128728
Medicago truncatula chr2 5 CH_mtr_135 6 7 9.22959e-17
Olea europaea chr13 5 CH_oeu_525 2 2 0.000320273
Oryza sativa ssp. japonica chr07 5 CH_osa_216 3 3 0.0000000167352
Petunia axillaris Peaxi162Scf00371 5 CH_pax_232 3 3 0.000000415808
Populus trichocarpa Chr04 5 CH_ptr_359 3 3 0.00000042096
Phaseolus vulgaris Chr06 5 CH_pvu_306 3 4 0.0000011335
Quercus lobata 5 5 CH_qlo_284 5 5 0.00000000000000298461
Rosa chinensis RcHm_v2.0_Chr5 5 CH_rch_293 4 4 0.0000000000133054
Salvia bowleyana GWHASIU00000005 5 CH_sbo_175 4 5 0.0000000000211915
Salix brachista GWHAAZH00000004 5 CH_sbr_270 3 3 0.000000333554
Sequoiadendron giganteum chr10 5 CH_sgi_1970 2 3 0.000146142
Sapria himalayana scaffold38_5640129 5 CH_shi_574 2 2 0.000857706
Sapria himalayana scaffold14_12630789 5 CH_shi_575 2 2 0.000857706
Solanum lycopersicum SL4.0ch02 5 CH_sly_409 3 5 0.00000180825
Schrenkiella parvula ch6-1 5 CH_spa_122 3 3 0.000000325462
Trifolium pratense Tp57577_TGAC_v2_LG2 5 CH_tpr_286 3 3 0.000001891
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_786 2 2 0.000929238
Zea mays 7 5 CH_zma_193 3 6 0.000000313695
Acer truncatum chr10 6 CH_acertr_336 3 3 0.00000041748
Arabidopsis lyrata scaffold_6 6 CH_aly_237 3 3 0.000000228728
Amaranthus hybridus AmaHy_arrow1_Scaffold_3 6 CH_amhyb_453 2 2 0.000841751
Arabidopsis thaliana Chr4 6 CH_ath_172 4 16 0.00000000898117
Brassica carinata ChrB01 6 CH_bca_137 5 8 0.00000000000075116
Brassica napus C09 6 CH_bna_221 4 4 0.000000000242702
Brassica napus A09 6 CH_bna_369 4 8 0.0000000169779
Brassica oleracea C9 6 CH_bol_345 3 4 0.00000141011
Brassica rapa A09 6 CH_bra_77 4 4 0.000000000117511
Beta vulgaris Chr6_EL10_PGA_scaffold0 6 CH_bvu_208 3 4 0.000000411243
Camellia sinensis var. sinensis Chr10 6 CH_camsi_1130 3 9 0.000179875
Camellia sinensis var. sinensis Chr8 6 CH_camsi_264 5 11 0.0000000000946657
Camellia sinensis var. sinensis Chr8 6 CH_camsi_687 3 3 0.00000214476
Coffea canephora chr2 6 CH_ccan_278 3 37 0.00000739694
Citrus clementina scaffold_2 6 CH_ccl_768 2 2 0.000820311
Cardamine hirsuta Chr2 6 CH_chi_236 4 9 0.0000000411505
Cardamine hirsuta Chr8 6 CH_chi_90 5 5 0.0000000000000791078
Chenopodium quinoa C_Quinoa_Scaffold_3035 6 CH_cqu_398 3 3 0.00000074089
Chenopodium quinoa C_Quinoa_Scaffold_2715 6 CH_cqu_482 3 4 0.00000296301
Capsella rubella scaffold_6 6 CH_cru_296 3 3 0.000000962292
Eucalyptus grandis Chr04 6 CH_egr_491 4 5 0.0000000002105
Eutrema salsugineum scaffold_3 6 CH_esa_186 3 3 0.000000304449
Fragaria vesca Fvb3 6 CH_fve_827 2 2 0.000883652
Helianthus annuus HanXRQChr12 6 CH_han_550 3 3 0.00000125437
Lotus japonicus chr6 6 CH_lja_223 3 3 0.000000429537
Magnolia biondii Chr11 6 CH_mbi_126 5 5 0.0000000000000835451
Magnolia biondii Chr18 6 CH_mbi_656 3 5 0.0000128728
Medicago truncatula chr2 6 CH_mtr_135 6 7 9.22959e-17
Olea europaea chr13 6 CH_oeu_525 2 2 0.000320273
Oryza sativa ssp. japonica chr07 6 CH_osa_216 3 3 0.0000000167352
Petunia axillaris Peaxi162Scf00371 6 CH_pax_232 3 3 0.000000415808
Populus trichocarpa Chr04 6 CH_ptr_359 3 3 0.00000042096
Phaseolus vulgaris Chr06 6 CH_pvu_306 3 4 0.0000011335
Quercus lobata 5 6 CH_qlo_284 5 5 0.00000000000000298461
Rosa chinensis RcHm_v2.0_Chr5 6 CH_rch_293 4 4 0.0000000000133054
Salvia bowleyana GWHASIU00000005 6 CH_sbo_175 4 5 0.0000000000211915
Salix brachista GWHAAZH00000004 6 CH_sbr_270 3 3 0.000000333554
Sequoiadendron giganteum chr10 6 CH_sgi_1970 2 3 0.000146142
Sapria himalayana scaffold38_5640129 6 CH_shi_574 2 2 0.000857706
Sapria himalayana scaffold14_12630789 6 CH_shi_575 2 2 0.000857706
Solanum lycopersicum SL4.0ch02 6 CH_sly_409 3 5 0.00000180825
Schrenkiella parvula ch6-1 6 CH_spa_122 3 3 0.000000325462
Trifolium pratense Tp57577_TGAC_v2_LG2 6 CH_tpr_286 3 3 0.000001891
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_786 2 2 0.000929238
Zea mays 7 6 CH_zma_193 3 6 0.000000313695

Available child term results

Ontology identifier Description Number of clusters
IPR030200 Equilibrative nucleotide transporter 2 22

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001