Functional clusters
Information
- Type InterPro
- Description Tyrosinase copper-binding domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_14 | 5 | CH_amhyb_91 | 3 | 3 | 0.0000000425145 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.10 | 5 | CH_arhy_1096 | 2 | 2 | 0.000299383 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.20 | 5 | CH_arhy_1335 | 2 | 3 | 0.000898109 |
| Corylus avellana | 2 | 5 | CH_cav_137 | 5 | 43 | 0.000000000249164 |
| Chara braunii | BFEA01000592 | 5 | CH_cbr_152 | 3 | 5 | 0.0000434252 |
| Chara braunii | BFEA01000405 | 5 | CH_cbr_310 | 3 | 10 | 0.000520096 |
| Carya illinoinensis | Chr09 | 5 | CH_cil_642 | 2 | 3 | 0.000185943 |
| Citrullus lanatus | CG_Chr03 | 5 | CH_cla_2 | 9 | 11 | 2.99381e-28 |
| Carica papaya | supercontig_27 | 5 | CH_cpa_654 | 2 | 2 | 0.000950661 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 5 | CH_eca_119 | 4 | 4 | 0.0000000000894535 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 5 | CH_eca_221 | 4 | 10 | 0.0000000187685 |
| Eucalyptus grandis | Chr04 | 5 | CH_egr_1055 | 2 | 2 | 0.0000585274 |
| Erythranthe guttata | scaffold_13 | 5 | CH_egut_65 | 7 | 12 | 3.06679e-18 |
| Lupinus albus | Lalb_Chr20 | 5 | CH_lal_494 | 2 | 2 | 0.000157447 |
| Lactuca sativa | Lsat_1_v8_lg_9 | 5 | CH_lsa_121 | 6 | 14 | 0.000000000000299462 |
| Malus domestica | Chr10 | 5 | CH_mdo_58 | 7 | 12 | 1.19291e-18 |
| Marchantia polymorpha | scaffold_121 | 5 | CH_mpo_45 | 5 | 5 | 0.000000000949527 |
| Populus trichocarpa | Chr01 | 5 | CH_ptr_41 | 8 | 10 | 1.51279e-23 |
| Quercus lobata | 10 | 5 | CH_qlo_1643 | 2 | 3 | 0.00046464 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 5 | CH_rch_569 | 3 | 4 | 0.0000000953515 |
| Salvia bowleyana | GWHASIU00000004 | 5 | CH_sbo_121 | 8 | 60 | 0.0000000000000499752 |
| Sechium edule | LG08 | 5 | CH_sed_390 | 2 | 2 | 0.000214026 |
| Sequoiadendron giganteum | chr8 | 5 | CH_sgi_1319 | 3 | 3 | 0.00000161972 |
| Sequoiadendron giganteum | chr5 | 5 | CH_sgi_1320 | 3 | 3 | 0.00000161972 |
| Solanum lycopersicum | SL4.0ch08 | 5 | CH_sly_31 | 8 | 11 | 1.12303e-24 |
| Selaginella moellendorffii | scaffold_112 | 5 | CH_smo_169 | 3 | 4 | 0.000014955 |
| Solanum pennellii | Spenn-ch08 | 5 | CH_spe_15 | 8 | 11 | 1.61166e-25 |
| Solanum tuberosum | ST4.03ch08 | 5 | CH_stu_25 | 9 | 16 | 7.71511e-27 |
| Tripterygium wilfordii | NC_052253.1 | 5 | CH_twi_341 | 2 | 2 | 0.0000557507 |
| Utricularia gibba | unitig_27 | 5 | CH_ugi_32 | 3 | 3 | 0.0000000100982 |
| Vigna mungo | CM024069.1 | 5 | CH_vmu_509 | 2 | 2 | 0.000387685 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_14 | 6 | CH_amhyb_91 | 3 | 3 | 0.0000000425145 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.10 | 6 | CH_arhy_1096 | 2 | 2 | 0.000299383 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.20 | 6 | CH_arhy_1335 | 2 | 3 | 0.000898109 |
| Corylus avellana | 2 | 6 | CH_cav_137 | 5 | 43 | 0.000000000249164 |
| Chara braunii | BFEA01000592 | 6 | CH_cbr_152 | 3 | 5 | 0.0000434252 |
| Chara braunii | BFEA01000405 | 6 | CH_cbr_310 | 3 | 10 | 0.000520096 |
| Carya illinoinensis | Chr09 | 6 | CH_cil_642 | 2 | 3 | 0.000185943 |
| Citrullus lanatus | CG_Chr03 | 6 | CH_cla_2 | 9 | 11 | 2.99381e-28 |
| Cucumis melo | chr12 | 6 | CH_cme_137 | 3 | 4 | 0.0000000267023 |
| Carica papaya | supercontig_27 | 6 | CH_cpa_654 | 2 | 2 | 0.000950661 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 6 | CH_eca_119 | 4 | 4 | 0.0000000000894535 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 6 | CH_eca_221 | 4 | 10 | 0.0000000187685 |
| Eucalyptus grandis | Chr04 | 6 | CH_egr_1055 | 2 | 2 | 0.0000585274 |
| Erythranthe guttata | scaffold_13 | 6 | CH_egut_65 | 7 | 12 | 3.06679e-18 |
| Lupinus albus | Lalb_Chr20 | 6 | CH_lal_494 | 2 | 2 | 0.000157447 |
| Lactuca sativa | Lsat_1_v8_lg_9 | 6 | CH_lsa_121 | 6 | 14 | 0.000000000000299462 |
| Malus domestica | Chr10 | 6 | CH_mdo_58 | 7 | 12 | 1.19291e-18 |
| Marchantia polymorpha | scaffold_121 | 6 | CH_mpo_45 | 5 | 5 | 0.000000000949527 |
| Populus trichocarpa | Chr01 | 6 | CH_ptr_41 | 8 | 10 | 1.51279e-23 |
| Quercus lobata | 10 | 6 | CH_qlo_1643 | 2 | 3 | 0.00046464 |
| Rosa chinensis | RcHm_v2.0_Chr6 | 6 | CH_rch_569 | 3 | 4 | 0.0000000953515 |
| Salvia bowleyana | GWHASIU00000004 | 6 | CH_sbo_121 | 8 | 60 | 0.0000000000000499752 |
| Sechium edule | LG08 | 6 | CH_sed_390 | 2 | 2 | 0.000214026 |
| Sequoiadendron giganteum | chr8 | 6 | CH_sgi_1319 | 3 | 3 | 0.00000161972 |
| Sequoiadendron giganteum | chr5 | 6 | CH_sgi_1320 | 3 | 3 | 0.00000161972 |
| Solanum lycopersicum | SL4.0ch08 | 6 | CH_sly_31 | 8 | 11 | 1.12303e-24 |
| Selaginella moellendorffii | scaffold_112 | 6 | CH_smo_169 | 3 | 4 | 0.000014955 |
| Solanum pennellii | Spenn-ch08 | 6 | CH_spe_15 | 8 | 11 | 1.61166e-25 |
| Solanum tuberosum | ST4.03ch08 | 6 | CH_stu_25 | 9 | 16 | 7.71511e-27 |
| Tripterygium wilfordii | NC_052253.1 | 6 | CH_twi_341 | 2 | 2 | 0.0000557507 |
| Utricularia gibba | unitig_27 | 6 | CH_ugi_32 | 3 | 3 | 0.0000000100982 |
| Vigna mungo | CM024069.1 | 6 | CH_vmu_509 | 2 | 2 | 0.000387685 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |