Functional clusters
Information
- Type InterPro
- Description SecY/SEC61-alpha family
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Acer truncatum | chr2 | 5 | CH_acertr_983 | 2 | 2 | 0.00070497 |
Brassica carinata | ChrB02 | 5 | CH_bca_1211 | 3 | 7 | 0.0000369209 |
Brassica carinata | ChrC08 | 5 | CH_bca_1611 | 3 | 12 | 0.000231885 |
Camellia sinensis var. sinensis | Chr5 | 5 | CH_camsi_759 | 3 | 6 | 0.00000529681 |
Cardamine hirsuta | Chr2 | 5 | CH_chi_334 | 3 | 3 | 0.00000118251 |
Magnolia biondii | Chr01 | 5 | CH_mbi_1077 | 2 | 3 | 0.000437077 |
Selenicereus undatus | Scaffold_33676 | 5 | CH_sun_381 | 2 | 2 | 0.000726639 |
Acer truncatum | chr2 | 6 | CH_acertr_983 | 2 | 2 | 0.00070497 |
Brassica carinata | ChrB02 | 6 | CH_bca_1211 | 3 | 7 | 0.0000369209 |
Brassica carinata | ChrC08 | 6 | CH_bca_1611 | 3 | 12 | 0.000231885 |
Camellia sinensis var. sinensis | Chr5 | 6 | CH_camsi_759 | 3 | 6 | 0.00000529681 |
Cardamine hirsuta | Chr2 | 6 | CH_chi_334 | 3 | 3 | 0.00000118251 |
Magnolia biondii | Chr01 | 6 | CH_mbi_1077 | 2 | 3 | 0.000437077 |
Selenicereus undatus | Scaffold_33676 | 6 | CH_sun_381 | 2 | 2 | 0.000726639 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |