Functional clusters
Information
- Type InterPro
- Description Alpha crystallin/Hsp20 domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_6 | 5 | CH_amhyb_204 | 3 | 3 | 0.0000636016 |
| Corylus avellana | 6 | 5 | CH_cav_422 | 4 | 10 | 0.0000232007 |
| Davidia involucrata | GWHABJS00000017 | 5 | CH_din_153 | 5 | 5 | 0.000000000419401 |
| Durio zibethinus | NW_019168481.1 | 5 | CH_dzi_449 | 3 | 3 | 0.000140754 |
| Lonicera japonica | GWHAAZE00000007 | 5 | CH_lonja_586 | 5 | 23 | 0.00000307077 |
| Magnolia biondii | Chr05 | 5 | CH_mbi_139 | 7 | 18 | 0.000000000000372099 |
| Medicago truncatula | chr4 | 5 | CH_mtr_408 | 5 | 8 | 0.00000000310324 |
| Papaver somniferum | NW_020619603.1 | 5 | CH_pso_845 | 5 | 35 | 0.0000459655 |
| Populus trichocarpa | Chr04 | 5 | CH_ptr_422 | 6 | 38 | 0.00000286745 |
| Striga asiatica | scaffold2 | 5 | CH_sas_34 | 6 | 26 | 0.0000000134419 |
| Salvia bowleyana | GWHASIU00000002 | 5 | CH_sbo_67 | 9 | 14 | 7.07692e-20 |
| Sequoiadendron giganteum | chr5 | 5 | CH_sgi_696 | 6 | 7 | 0.000000000404354 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_6 | 6 | CH_amhyb_204 | 3 | 3 | 0.0000636016 |
| Corylus avellana | 6 | 6 | CH_cav_422 | 4 | 10 | 0.0000232007 |
| Davidia involucrata | GWHABJS00000017 | 6 | CH_din_153 | 5 | 5 | 0.000000000419401 |
| Durio zibethinus | NW_019168481.1 | 6 | CH_dzi_449 | 3 | 3 | 0.000140754 |
| Lonicera japonica | GWHAAZE00000007 | 6 | CH_lonja_586 | 5 | 23 | 0.00000307077 |
| Magnolia biondii | Chr05 | 6 | CH_mbi_139 | 7 | 18 | 0.000000000000372099 |
| Medicago truncatula | chr4 | 6 | CH_mtr_408 | 5 | 8 | 0.00000000310324 |
| Papaver somniferum | NW_020619603.1 | 6 | CH_pso_845 | 5 | 35 | 0.0000459655 |
| Populus trichocarpa | Chr04 | 6 | CH_ptr_422 | 6 | 38 | 0.00000286745 |
| Striga asiatica | scaffold2 | 6 | CH_sas_34 | 6 | 26 | 0.0000000134419 |
| Salvia bowleyana | GWHASIU00000002 | 6 | CH_sbo_67 | 9 | 14 | 7.07692e-20 |
| Sequoiadendron giganteum | chr5 | 6 | CH_sgi_696 | 6 | 7 | 0.000000000404354 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |