Functional clusters

Information

  • Type InterPro
  • Description SAC domain

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata Contig74 5 CH_bca_1341 4 33 0.0000700563
Camellia sinensis var. sinensis Chr4 5 CH_camsi_794 3 5 0.00000901709
Coffea canephora chr6 5 CH_ccan_461 2 2 0.0000894371
Malus domestica Chr12 5 CH_mdo_631 4 20 0.00000241656
Rosa chinensis RcHm_v2.0_Chr3 5 CH_rch_1463 2 2 0.00083717
Sapria himalayana scaffold42_4718812 5 CH_shi_539 2 2 0.000571804
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_748 3 20 0.000823813
Brassica carinata Contig74 6 CH_bca_1341 4 33 0.0000700563
Camellia sinensis var. sinensis Chr4 6 CH_camsi_794 3 5 0.00000901709
Coffea canephora chr6 6 CH_ccan_461 2 2 0.0000894371
Malus domestica Chr12 6 CH_mdo_631 4 20 0.00000241656
Rosa chinensis RcHm_v2.0_Chr3 6 CH_rch_1463 2 2 0.00083717
Sapria himalayana scaffold42_4718812 6 CH_shi_539 2 2 0.000571804
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_748 3 20 0.000823813

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001