Functional clusters

Information

  • Type InterPro
  • Description Peptidase M18

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group17 5 CH_ach_445 2 2 0.000325928
Avicennia marina ScioBoG_102837_HRSCAF_103074 5 CH_ama_190 2 2 0.000517331
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.10 5 CH_arhy_1095 2 2 0.000299383
Amborella trichopoda AmTr_v1.0_scaffold00138 5 CH_atr_480 2 2 0.000238322
Brassica carinata ChrC01 5 CH_bca_1425 2 2 0.000128259
Carpinus fangiana Cfa08 5 CH_cfa_251 3 4 0.000000344124
Carya illinoinensis Chr13 5 CH_cil_804 2 2 0.000619828
Cucumis sativus L. chr1 5 CH_csa_449 2 2 0.000500856
Eucalyptus grandis Chr10 5 CH_egr_1174 2 2 0.000175582
Fragaria vesca Fvb7 5 CH_fve_378 3 3 0.000000624692
Fragaria vesca Fvb1 5 CH_fve_506 3 7 0.0000218481
Glycine max Gm10 5 CH_gma_799 2 2 0.000379557
Sequoiadendron giganteum chr8 5 CH_sgi_2421 2 2 0.000487151
Sequoiadendron giganteum chr6 5 CH_sgi_991 3 3 0.0000000355983
Sapria himalayana scaffold44_4510576 5 CH_shi_459 2 4 0.000343063
Vigna mungo CM024071.1 5 CH_vmu_436 2 2 0.000193842
Actinidia chinensis Lachesis_group17 6 CH_ach_445 2 2 0.000325928
Avicennia marina ScioBoG_102837_HRSCAF_103074 6 CH_ama_190 2 2 0.000517331
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.10 6 CH_arhy_1095 2 2 0.000299383
Amborella trichopoda AmTr_v1.0_scaffold00138 6 CH_atr_480 2 2 0.000238322
Brassica carinata ChrC01 6 CH_bca_1425 2 2 0.000128259
Carpinus fangiana Cfa08 6 CH_cfa_251 3 4 0.000000344124
Carya illinoinensis Chr13 6 CH_cil_804 2 2 0.000619828
Cucumis sativus L. chr1 6 CH_csa_449 2 2 0.000500856
Eucalyptus grandis Chr10 6 CH_egr_1174 2 2 0.000175582
Fragaria x ananassa Fvb1-3 6 CH_fan_76 8 67 0.00000000000000585583
Fragaria vesca Fvb7 6 CH_fve_378 3 3 0.000000624692
Fragaria vesca Fvb1 6 CH_fve_506 3 7 0.0000218481
Glycine max Gm10 6 CH_gma_799 2 2 0.000379557
Sequoiadendron giganteum chr8 6 CH_sgi_2421 2 2 0.000487151
Sequoiadendron giganteum chr6 6 CH_sgi_991 3 3 0.0000000355983
Sapria himalayana scaffold44_4510576 6 CH_shi_459 2 4 0.000343063
Vigna mungo CM024071.1 6 CH_vmu_436 2 2 0.000193842

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001