Functional clusters
Information
- Type InterPro
- Description Translation elongation factor IF5A-like
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.05 | 5 | CH_arhy_1233 | 2 | 2 | 0.000628705 |
| Brassica carinata | ChrB07 | 5 | CH_bca_627 | 3 | 3 | 0.000000311873 |
| Beta vulgaris | Chr6_EL10_PGA_scaffold0 | 5 | CH_bvu_402 | 2 | 3 | 0.000248365 |
| Camellia sinensis var. sinensis | Chr10 | 5 | CH_camsi_1013 | 3 | 11 | 0.00011433 |
| Carya illinoinensis | Chr15 | 5 | CH_cil_531 | 3 | 11 | 0.0000332482 |
| Corchorus olitorius | AWUE01019716.1 | 5 | CH_col_140 | 2 | 2 | 0.000292099 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3751 | 5 | CH_cqu_354 | 3 | 4 | 0.000000269394 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1214 | 5 | CH_cqu_355 | 3 | 4 | 0.000000269394 |
| Davidia involucrata | GWHABJS00000006 | 5 | CH_din_416 | 3 | 8 | 0.0000176371 |
| Helianthus annuus | HanXRQChr16 | 5 | CH_han_1047 | 3 | 19 | 0.00035736 |
| Helianthus annuus | HanXRQChr15 | 5 | CH_han_555 | 3 | 4 | 0.00000147817 |
| Quercus lobata | 3 | 5 | CH_qlo_859 | 3 | 4 | 0.000000319847 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.05 | 6 | CH_arhy_1233 | 2 | 2 | 0.000628705 |
| Brassica carinata | ChrB07 | 6 | CH_bca_627 | 3 | 3 | 0.000000311873 |
| Beta vulgaris | Chr6_EL10_PGA_scaffold0 | 6 | CH_bvu_402 | 2 | 3 | 0.000248365 |
| Camellia sinensis var. sinensis | Chr10 | 6 | CH_camsi_1013 | 3 | 11 | 0.00011433 |
| Carya illinoinensis | Chr15 | 6 | CH_cil_531 | 3 | 11 | 0.0000332482 |
| Corchorus olitorius | AWUE01019716.1 | 6 | CH_col_140 | 2 | 2 | 0.000292099 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3751 | 6 | CH_cqu_354 | 3 | 4 | 0.000000269394 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1214 | 6 | CH_cqu_355 | 3 | 4 | 0.000000269394 |
| Davidia involucrata | GWHABJS00000006 | 6 | CH_din_416 | 3 | 8 | 0.0000176371 |
| Helianthus annuus | HanXRQChr16 | 6 | CH_han_1047 | 3 | 19 | 0.00035736 |
| Helianthus annuus | HanXRQChr15 | 6 | CH_han_555 | 3 | 4 | 0.00000147817 |
| Quercus lobata | 3 | 6 | CH_qlo_859 | 3 | 4 | 0.000000319847 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |