Functional clusters
Information
- Type InterPro
- Description Zinc finger, RanBP2-type
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr9 | 5 | CH_acertr_442 | 4 | 17 | 0.00000963944 |
| Brassica carinata | ChrC01 | 5 | CH_bca_1000 | 3 | 3 | 0.00000730674 |
| Helianthus annuus | HanXRQChr12 | 5 | CH_han_678 | 3 | 3 | 0.00000818478 |
| Rhododendron simsii | chr09 | 5 | CH_rsi_271 | 5 | 8 | 0.000000000309115 |
| Sequoiadendron giganteum | chr2 | 5 | CH_sgi_524 | 5 | 8 | 0.00000000000304301 |
| Trochodendron aralioides | group1 | 5 | CH_tar_925 | 3 | 7 | 0.00068977 |
| Acer truncatum | chr9 | 6 | CH_acertr_442 | 4 | 17 | 0.00000963944 |
| Brassica carinata | ChrC01 | 6 | CH_bca_1000 | 3 | 3 | 0.00000730674 |
| Helianthus annuus | HanXRQChr12 | 6 | CH_han_678 | 3 | 3 | 0.00000818478 |
| Rhododendron simsii | chr09 | 6 | CH_rsi_271 | 5 | 8 | 0.000000000309115 |
| Sequoiadendron giganteum | chr2 | 6 | CH_sgi_524 | 5 | 8 | 0.00000000000304301 |
| Trochodendron aralioides | group1 | 6 | CH_tar_925 | 3 | 7 | 0.00068977 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |