Functional clusters

Information

  • Type InterPro
  • Description NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_10 5 CH_amhyb_102 6 71 0.0000000665763
Amaranthus hybridus AmaHy_arrow1_Scaffold_10 5 CH_amhyb_440 4 55 0.000815718
Arachis hypogaea arahy.Tifrunner.gnm1.scaffold_22 5 CH_arhy_598 6 76 0.000000697038
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.02 5 CH_arhy_659 4 10 0.00000208035
Arachis hypogaea arahy.Tifrunner.gnm1.scaffold_36 5 CH_arhy_798 5 52 0.0000147323
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.06 5 CH_arhy_907 3 4 0.0000663379
Arabidopsis thaliana ChrC 5 CH_ath_248 4 38 0.000000363774
Arabidopsis thaliana ChrM 5 CH_ath_574 3 36 0.000491171
Brassica oleracea Boleracea_scaffold_29 5 CH_bol_181 7 67 0.000000006915
Brassica oleracea Boleracea_scaffold_35 5 CH_bol_433 5 39 0.00000920512
Brassica oleracea Boleracea_scaffold_47 5 CH_bol_532 4 16 0.0000401083
Brassica oleracea Boleracea_scaffold_45 5 CH_bol_761 4 28 0.000447956
Brassica rapa Brapa_scaffold_59 5 CH_bra_109 6 37 0.00000000446597
Beta vulgaris Scaffold_0015 5 CH_bvu_45 8 38 0.0000000000000117679
Camellia sinensis var. sinensis Chr12 5 CH_camsi_1204 2 2 0.000275128
Cicer arietinum L. Ca_LG7_v3 5 CH_car_347 2 2 0.000466981
Ceratophyllum demersum 1 5 CH_cde_152 4 69 0.0000063598
Cardamine hirsuta ChrC 5 CH_chi_549 3 21 0.0000951689
Citrullus lanatus CG_Chr09 5 CH_cla_283 2 2 0.000266134
Carica papaya supercontig_2 5 CH_cpa_482 2 2 0.000285198
Chenopodium quinoa C_Quinoa_Scaffold_3525 5 CH_cqu_313 4 17 0.0000000955597
Cucumis sativus L. scaffold18_1 5 CH_csa_448 2 2 0.000500856
Daucus carota DCARv2_PT 5 CH_dca_225 4 17 0.000000232923
Erigeron canadensis Conyza_canadensis_unscaffolded:263 5 CH_eca_489 3 19 0.0000292409
Erythranthe guttata scaffold_4 5 CH_egut_445 4 29 0.0000273138
Glycine max Gm01 5 CH_gma_870 2 2 0.000569336
Helianthus annuus HanXRQChr02 5 CH_han_720 4 10 0.0000153458
Helianthus annuus HanXRQChr05 5 CH_han_758 4 11 0.0000240942
Helianthus annuus HanXRQCP 5 CH_han_853 4 14 0.0000728988
Lupinus albus Lalb_Chr07 5 CH_lal_109 6 20 0.000000000558448
Lupinus albus Lalb_Chr02 5 CH_lal_367 3 3 0.0000270421
Lupinus albus Lalb_Chr25 5 CH_lal_734 3 6 0.000539778
Lotus japonicus Contig00439 5 CH_lja_82 6 33 0.000000000138919
Lonicera japonica GWHAAZE00000002 5 CH_lonja_310 6 71 0.00000000113543
Marchantia polymorpha scaffold_92 5 CH_mpo_210 2 2 0.000662654
Nelumbo nucifera chr1 5 CH_nnu_216 5 44 0.000000268576
Nelumbo nucifera scaffold064 5 CH_nnu_247 4 15 0.00000108602
Nicotiana tabacum Nitab4.5_0000172 5 CH_nta_146 4 8 0.0000112944
Nicotiana tabacum Nitab4.5_0001788 5 CH_nta_294 3 4 0.000393658
Nicotiana tabacum Nitab4.5_0000172 5 CH_nta_32 9 55 0.000000000006904
Punica granatum NC_035240.1 5 CH_pgr_241 4 35 0.000000331156
Papaver somniferum NC_029434.1 5 CH_pso_485 4 36 0.000000141246
Populus trichocarpa Chr07 5 CH_ptr_276 5 34 0.0000000183456
Rosa chinensis RcHm_v2.0_MT 5 CH_rch_416 6 51 0.000000002187
Rosa chinensis RcHm_v2.0_CP 5 CH_rch_468 5 22 0.0000000101028
Rosa chinensis RcHm_v2.0_CP 5 CH_rch_875 3 4 0.0000126787
Salvia bowleyana GWHASIU00000001 5 CH_sbo_355 4 21 0.00000120537
Salvia bowleyana GWHASIU00000001 5 CH_sbo_471 4 49 0.000042449
Salix brachista GWHAAZH00000020 5 CH_sbr_569 3 24 0.000240594
Sechium edule Contig00297 5 CH_sed_190 4 21 0.000000455259
Sapria himalayana scaffold10_15062905 5 CH_shi_476 2 2 0.000343083
Solanum lycopersicum SL4.0ch00 5 CH_sly_193 8 57 0.000000000634958
Solanum lycopersicum SL4.0ch11 5 CH_sly_296 5 11 0.0000000865549
Solanum lycopersicum SL4.0ch00 5 CH_sly_354 7 73 0.0000004864
Solanum lycopersicum SL4.0ch01 5 CH_sly_404 5 18 0.00000159255
Solanum lycopersicum SL4.0ch02 5 CH_sly_925 4 21 0.000820552
Selaginella moellendorffii scaffold_175 5 CH_smo_200 3 21 0.0000694713
Schrenkiella parvula ch3-4 5 CH_spa_182 3 20 0.0000105937
Trochodendron aralioides group16 5 CH_tar_640 2 2 0.00018011
Utricularia gibba unitig_87 5 CH_ugi_68 4 34 0.00000114914
Vitis vinifera chrUn 5 CH_vvi_765 2 2 0.00076063
Zea mays 9 5 CH_zma_81 4 6 0.0000000000902276
Amaranthus hybridus AmaHy_arrow1_Scaffold_10 6 CH_amhyb_102 6 71 0.0000000665763
Amaranthus hybridus AmaHy_arrow1_Scaffold_10 6 CH_amhyb_440 4 55 0.000815718
Arachis hypogaea arahy.Tifrunner.gnm1.scaffold_22 6 CH_arhy_598 6 76 0.000000697038
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.02 6 CH_arhy_659 4 10 0.00000208035
Arachis hypogaea arahy.Tifrunner.gnm1.scaffold_36 6 CH_arhy_798 5 52 0.0000147323
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.06 6 CH_arhy_907 3 4 0.0000663379
Arabidopsis thaliana ChrC 6 CH_ath_248 4 38 0.000000363774
Arabidopsis thaliana ChrM 6 CH_ath_574 3 36 0.000491171
Brassica oleracea Boleracea_scaffold_29 6 CH_bol_181 7 67 0.000000006915
Brassica oleracea Boleracea_scaffold_35 6 CH_bol_433 5 39 0.00000920512
Brassica oleracea Boleracea_scaffold_47 6 CH_bol_532 4 16 0.0000401083
Brassica oleracea Boleracea_scaffold_45 6 CH_bol_761 4 28 0.000447956
Brassica rapa Brapa_scaffold_59 6 CH_bra_109 6 37 0.00000000446597
Beta vulgaris Scaffold_0015 6 CH_bvu_45 8 38 0.0000000000000117679
Camellia sinensis var. sinensis Chr12 6 CH_camsi_1204 2 2 0.000275128
Cicer arietinum L. Ca_LG7_v3 6 CH_car_347 2 2 0.000466981
Ceratophyllum demersum 1 6 CH_cde_152 4 69 0.0000063598
Cardamine hirsuta ChrC 6 CH_chi_549 3 21 0.0000951689
Citrullus lanatus CG_Chr09 6 CH_cla_283 2 2 0.000266134
Carica papaya supercontig_2 6 CH_cpa_482 2 2 0.000285198
Chenopodium quinoa C_Quinoa_Scaffold_3525 6 CH_cqu_313 4 17 0.0000000955597
Cucumis sativus L. scaffold18_1 6 CH_csa_448 2 2 0.000500856
Daucus carota DCARv2_PT 6 CH_dca_225 4 17 0.000000232923
Erigeron canadensis Conyza_canadensis_unscaffolded:263 6 CH_eca_489 3 19 0.0000292409
Erythranthe guttata scaffold_4 6 CH_egut_445 4 29 0.0000273138
Fragaria x ananassa Fvb2-2 6 CH_fan_279 3 3 0.0000000287605
Glycine max Gm01 6 CH_gma_870 2 2 0.000569336
Helianthus annuus HanXRQChr02 6 CH_han_720 4 10 0.0000153458
Helianthus annuus HanXRQChr05 6 CH_han_758 4 11 0.0000240942
Helianthus annuus HanXRQCP 6 CH_han_853 4 14 0.0000728988
Lupinus albus Lalb_Chr07 6 CH_lal_109 6 20 0.000000000558448
Lupinus albus Lalb_Chr02 6 CH_lal_367 3 3 0.0000270421
Lupinus albus Lalb_Chr25 6 CH_lal_734 3 6 0.000539778
Lotus japonicus Contig00439 6 CH_lja_82 6 33 0.000000000138919
Lonicera japonica GWHAAZE00000002 6 CH_lonja_310 6 71 0.00000000113543
Marchantia polymorpha scaffold_92 6 CH_mpo_210 2 2 0.000662654
Nelumbo nucifera chr1 6 CH_nnu_216 5 44 0.000000268576
Nelumbo nucifera scaffold064 6 CH_nnu_247 4 15 0.00000108602
Nicotiana tabacum Nitab4.5_0000172 6 CH_nta_146 4 8 0.0000112944
Nicotiana tabacum Nitab4.5_0001788 6 CH_nta_294 3 4 0.000393658
Nicotiana tabacum Nitab4.5_0000172 6 CH_nta_32 9 55 0.000000000006904
Punica granatum NC_035240.1 6 CH_pgr_241 4 35 0.000000331156
Papaver somniferum NC_029434.1 6 CH_pso_485 4 36 0.000000141246
Populus trichocarpa Chr07 6 CH_ptr_276 5 34 0.0000000183456
Rosa chinensis RcHm_v2.0_MT 6 CH_rch_416 6 51 0.000000002187
Rosa chinensis RcHm_v2.0_CP 6 CH_rch_468 5 22 0.0000000101028
Rosa chinensis RcHm_v2.0_CP 6 CH_rch_875 3 4 0.0000126787
Salvia bowleyana GWHASIU00000001 6 CH_sbo_355 4 21 0.00000120537
Salvia bowleyana GWHASIU00000001 6 CH_sbo_471 4 49 0.000042449
Salix brachista GWHAAZH00000020 6 CH_sbr_569 3 24 0.000240594
Sechium edule Contig00297 6 CH_sed_190 4 21 0.000000455259
Sapria himalayana scaffold10_15062905 6 CH_shi_476 2 2 0.000343083
Solanum lycopersicum SL4.0ch00 6 CH_sly_193 8 57 0.000000000634958
Solanum lycopersicum SL4.0ch11 6 CH_sly_296 5 11 0.0000000865549
Solanum lycopersicum SL4.0ch00 6 CH_sly_354 7 73 0.0000004864
Solanum lycopersicum SL4.0ch01 6 CH_sly_404 5 18 0.00000159255
Solanum lycopersicum SL4.0ch02 6 CH_sly_925 4 21 0.000820552
Selaginella moellendorffii scaffold_175 6 CH_smo_200 3 21 0.0000694713
Schrenkiella parvula ch3-4 6 CH_spa_182 3 20 0.0000105937
Trochodendron aralioides group16 6 CH_tar_640 2 2 0.00018011
Utricularia gibba unitig_87 6 CH_ugi_68 4 34 0.00000114914
Vitis vinifera chrUn 6 CH_vvi_765 2 2 0.00076063
Zea mays 9 6 CH_zma_81 4 6 0.0000000000902276

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001