Functional clusters

Information

  • Type InterPro
  • Description Gdt1 family

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB07 5 CH_bca_684 3 3 0.000000559315
Camellia sinensis var. sinensis Chr6 5 CH_camsi_661 3 4 0.00000151373
Carica papaya supercontig_59 5 CH_cpa_562 2 2 0.000570396
Gossypium raimondii Chr13 5 CH_gra_663 2 2 0.00080416
Lupinus albus Lalb_Chr03 5 CH_lal_237 3 3 0.000000495806
Malus domestica Chr13 5 CH_mdo_580 3 4 0.00000103527
Quercus lobata 1 5 CH_qlo_1693 2 2 0.000516289
Rhododendron simsii chr09 5 CH_rsi_1023 2 2 0.000967961
Salvia bowleyana GWHASIU00000004 5 CH_sbo_514 3 24 0.0000627736
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_785 2 2 0.000929238
Brassica carinata ChrB07 6 CH_bca_684 3 3 0.000000559315
Camellia sinensis var. sinensis Chr6 6 CH_camsi_661 3 4 0.00000151373
Carica papaya supercontig_59 6 CH_cpa_562 2 2 0.000570396
Gossypium raimondii Chr13 6 CH_gra_663 2 2 0.00080416
Lupinus albus Lalb_Chr03 6 CH_lal_237 3 3 0.000000495806
Malus domestica Chr13 6 CH_mdo_580 3 4 0.00000103527
Quercus lobata 1 6 CH_qlo_1693 2 2 0.000516289
Rhododendron simsii chr09 6 CH_rsi_1023 2 2 0.000967961
Salvia bowleyana GWHASIU00000004 6 CH_sbo_514 3 24 0.0000627736
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_785 2 2 0.000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001