Functional clusters
Information
- Type InterPro
- Description Membrane insertase YidC/ALB3/OXA1/COX18
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-1 | 5 | CH_aar_187 | 3 | 3 | 0.00000149828 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.03 | 5 | CH_arhy_614 | 3 | 4 | 0.000000887261 |
| Amborella trichopoda | AmTr_v1.0_scaffold00032 | 5 | CH_atr_631 | 2 | 2 | 0.000794407 |
| Brassica carinata | ChrC02 | 5 | CH_bca_826 | 3 | 3 | 0.00000178213 |
| Brassica napus | C04 | 5 | CH_bna_828 | 3 | 5 | 0.0000134324 |
| Camellia sinensis var. sinensis | Chr10 | 5 | CH_camsi_1539 | 2 | 2 | 0.000962949 |
| Cicer arietinum L. | Ca_LG3_v3 | 5 | CH_car_404 | 2 | 2 | 0.000778301 |
| Eutrema salsugineum | scaffold_22 | 5 | CH_esa_204 | 3 | 3 | 0.000000730677 |
| Lotus japonicus | chr2 | 5 | CH_lja_594 | 2 | 2 | 0.000715077 |
| Salvia bowleyana | GWHASIU00000001 | 5 | CH_sbo_398 | 3 | 6 | 0.00000521473 |
| Sequoiadendron giganteum | chr9 | 5 | CH_sgi_1128 | 3 | 3 | 0.000000199351 |
| Sapria himalayana | scaffold4_21100006 | 5 | CH_shi_420 | 2 | 2 | 0.000171541 |
| Tarenaya hassleriana | NW_010965946.1 | 5 | CH_tha_16 | 7 | 11 | 5.86358e-17 |
| Utricularia gibba | unitig_32 | 5 | CH_ugi_82 | 3 | 5 | 0.00000353321 |
| Aethionema arabicum | LG-1 | 6 | CH_aar_187 | 3 | 3 | 0.00000149828 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.03 | 6 | CH_arhy_614 | 3 | 4 | 0.000000887261 |
| Amborella trichopoda | AmTr_v1.0_scaffold00032 | 6 | CH_atr_631 | 2 | 2 | 0.000794407 |
| Brassica carinata | ChrC02 | 6 | CH_bca_826 | 3 | 3 | 0.00000178213 |
| Brassica napus | C04 | 6 | CH_bna_828 | 3 | 5 | 0.0000134324 |
| Camellia sinensis var. sinensis | Chr10 | 6 | CH_camsi_1539 | 2 | 2 | 0.000962949 |
| Cicer arietinum L. | Ca_LG3_v3 | 6 | CH_car_404 | 2 | 2 | 0.000778301 |
| Eutrema salsugineum | scaffold_22 | 6 | CH_esa_204 | 3 | 3 | 0.000000730677 |
| Lotus japonicus | chr2 | 6 | CH_lja_594 | 2 | 2 | 0.000715077 |
| Salvia bowleyana | GWHASIU00000001 | 6 | CH_sbo_398 | 3 | 6 | 0.00000521473 |
| Sequoiadendron giganteum | chr9 | 6 | CH_sgi_1128 | 3 | 3 | 0.000000199351 |
| Sapria himalayana | scaffold4_21100006 | 6 | CH_shi_420 | 2 | 2 | 0.000171541 |
| Tarenaya hassleriana | NW_010965946.1 | 6 | CH_tha_16 | 7 | 11 | 5.86358e-17 |
| Utricularia gibba | unitig_32 | 6 | CH_ugi_82 | 3 | 5 | 0.00000353321 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |