Functional clusters

Information

  • Type InterPro
  • Description Pseudouridine synthase, TruD

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_362 5 CH_aag_187 2 2 0.0000802568
Acer truncatum chr2 5 CH_acertr_561 2 2 0.000070497
Corylus avellana 2 5 CH_cav_493 2 2 0.0000766695
Coffea canephora chr2 5 CH_ccan_501 2 9 0.000153318
Citrullus lanatus CG_Chr06 5 CH_cla_316 2 5 0.000532222
Cucumis sativus L. chr1 5 CH_csa_380 2 3 0.000250417
Davidia involucrata GWHABJS00000002 5 CH_din_453 2 2 0.0000500125
Sapria himalayana scaffold4_21100006 5 CH_shi_458 2 4 0.000343063
Solanum pennellii Spenn-ch01 5 CH_spe_536 2 2 0.000044479
Anthoceros agrestis Sc2ySwM_362 6 CH_aag_187 2 2 0.0000802568
Acer truncatum chr2 6 CH_acertr_561 2 2 0.000070497
Corylus avellana 2 6 CH_cav_493 2 2 0.0000766695
Coffea canephora chr2 6 CH_ccan_501 2 9 0.000153318
Citrullus lanatus CG_Chr06 6 CH_cla_316 2 5 0.000532222
Cucumis sativus L. chr1 6 CH_csa_380 2 3 0.000250417
Davidia involucrata GWHABJS00000002 6 CH_din_453 2 2 0.0000500125
Sapria himalayana scaffold4_21100006 6 CH_shi_458 2 4 0.000343063
Solanum pennellii Spenn-ch01 6 CH_spe_536 2 2 0.000044479

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001