Functional clusters
Information
- Type InterPro
- Description DNA topoisomerase I
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Actinidia chinensis | Lachesis_group9 | 5 | CH_ach_443 | 2 | 2 | 0.000325928 |
Arabidopsis lyrata | scaffold_8 | 5 | CH_aly_429 | 2 | 2 | 0.0000660044 |
Arabidopsis thaliana | Chr5 | 5 | CH_ath_410 | 2 | 3 | 0.0000859463 |
Brassica napus | A02 | 5 | CH_bna_1219 | 2 | 2 | 0.000278425 |
Brassica napus | C02 | 5 | CH_bna_1220 | 2 | 2 | 0.000278425 |
Brassica oleracea | C2 | 5 | CH_bol_657 | 2 | 2 | 0.000196117 |
Cardamine hirsuta | Chr8 | 5 | CH_chi_698 | 2 | 2 | 0.000414723 |
Capsella rubella | scaffold_8 | 5 | CH_cru_626 | 2 | 3 | 0.000657999 |
Eutrema salsugineum | scaffold_2 | 5 | CH_esa_332 | 2 | 2 | 0.0000761499 |
Punica granatum | NC_045133.1 | 5 | CH_pgr_470 | 2 | 3 | 0.000225098 |
Papaver somniferum | NC_039362.1 | 5 | CH_pso_284 | 4 | 11 | 0.00000000039614 |
Schrenkiella parvula | ch6-6 | 5 | CH_spa_92 | 3 | 3 | 0.0000000371957 |
Actinidia chinensis | Lachesis_group9 | 6 | CH_ach_443 | 2 | 2 | 0.000325928 |
Arabidopsis lyrata | scaffold_8 | 6 | CH_aly_429 | 2 | 2 | 0.0000660044 |
Arabidopsis thaliana | Chr5 | 6 | CH_ath_410 | 2 | 3 | 0.0000859463 |
Brassica napus | A02 | 6 | CH_bna_1219 | 2 | 2 | 0.000278425 |
Brassica napus | C02 | 6 | CH_bna_1220 | 2 | 2 | 0.000278425 |
Brassica oleracea | C2 | 6 | CH_bol_657 | 2 | 2 | 0.000196117 |
Cardamine hirsuta | Chr8 | 6 | CH_chi_698 | 2 | 2 | 0.000414723 |
Capsella rubella | scaffold_8 | 6 | CH_cru_626 | 2 | 3 | 0.000657999 |
Eutrema salsugineum | scaffold_2 | 6 | CH_esa_332 | 2 | 2 | 0.0000761499 |
Fragaria x ananassa | Fvb6-2 | 6 | CH_fan_476 | 3 | 5 | 0.00000186911 |
Punica granatum | NC_045133.1 | 6 | CH_pgr_470 | 2 | 3 | 0.000225098 |
Papaver somniferum | NC_039362.1 | 6 | CH_pso_284 | 4 | 11 | 0.00000000039614 |
Schrenkiella parvula | ch6-6 | 6 | CH_spa_92 | 3 | 3 | 0.0000000371957 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |