Functional clusters

Information

  • Type InterPro
  • Description DNA topoisomerase I

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group9 5 CH_ach_443 2 2 0.000325928
Arabidopsis lyrata scaffold_8 5 CH_aly_429 2 2 0.0000660044
Arabidopsis thaliana Chr5 5 CH_ath_410 2 3 0.0000859463
Brassica napus A02 5 CH_bna_1219 2 2 0.000278425
Brassica napus C02 5 CH_bna_1220 2 2 0.000278425
Brassica oleracea C2 5 CH_bol_657 2 2 0.000196117
Cardamine hirsuta Chr8 5 CH_chi_698 2 2 0.000414723
Capsella rubella scaffold_8 5 CH_cru_626 2 3 0.000657999
Eutrema salsugineum scaffold_2 5 CH_esa_332 2 2 0.0000761499
Punica granatum NC_045133.1 5 CH_pgr_470 2 3 0.000225098
Papaver somniferum NC_039362.1 5 CH_pso_284 4 11 0.00000000039614
Schrenkiella parvula ch6-6 5 CH_spa_92 3 3 0.0000000371957
Actinidia chinensis Lachesis_group9 6 CH_ach_443 2 2 0.000325928
Arabidopsis lyrata scaffold_8 6 CH_aly_429 2 2 0.0000660044
Arabidopsis thaliana Chr5 6 CH_ath_410 2 3 0.0000859463
Brassica napus A02 6 CH_bna_1219 2 2 0.000278425
Brassica napus C02 6 CH_bna_1220 2 2 0.000278425
Brassica oleracea C2 6 CH_bol_657 2 2 0.000196117
Cardamine hirsuta Chr8 6 CH_chi_698 2 2 0.000414723
Capsella rubella scaffold_8 6 CH_cru_626 2 3 0.000657999
Eutrema salsugineum scaffold_2 6 CH_esa_332 2 2 0.0000761499
Fragaria x ananassa Fvb6-2 6 CH_fan_476 3 5 0.00000186911
Punica granatum NC_045133.1 6 CH_pgr_470 2 3 0.000225098
Papaver somniferum NC_039362.1 6 CH_pso_284 4 11 0.00000000039614
Schrenkiella parvula ch6-6 6 CH_spa_92 3 3 0.0000000371957

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001