Functional clusters

Information

  • Type InterPro
  • Description Aromatic amino acid beta-eliminating lyase/threonine aldolase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_6 5 CH_amhyb_434 2 3 0.000757523
Brassica carinata ChrC05 5 CH_bca_2129 2 2 0.000961939
Brassica napus C08 5 CH_bna_262 5 44 0.000000000763931
Corylus avellana 2 5 CH_cav_290 3 10 0.00000105783
Nelumbo nucifera chr3 5 CH_nnu_496 2 2 0.00028901
Petunia axillaris Peaxi162Scf00135 5 CH_pax_403 2 2 0.0000703556
Rhododendron simsii chr05 5 CH_rsi_779 2 2 0.000193592
Sechium edule LG06 5 CH_sed_488 2 3 0.000642039
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_574 2 2 0.000278772
Amaranthus hybridus AmaHy_arrow1_Scaffold_6 6 CH_amhyb_434 2 3 0.000757523
Brassica carinata ChrC05 6 CH_bca_2129 2 2 0.000961939
Brassica napus C08 6 CH_bna_262 5 44 0.000000000763931
Corylus avellana 2 6 CH_cav_290 3 10 0.00000105783
Nelumbo nucifera chr3 6 CH_nnu_496 2 2 0.00028901
Petunia axillaris Peaxi162Scf00135 6 CH_pax_403 2 2 0.0000703556
Rhododendron simsii chr05 6 CH_rsi_779 2 2 0.000193592
Sechium edule LG06 6 CH_sed_488 2 3 0.000642039
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_574 2 2 0.000278772

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001