Functional clusters
Information
- Type InterPro
- Description AP2/ERF domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Actinidia chinensis | Lachesis_group23 | 5 | CH_ach_242 | 4 | 4 | 0.0000343626 |
| Aquilegia oxysepala | CHR07 | 5 | CH_aox_244 | 4 | 4 | 0.00000492708 |
| Brassica carinata | ChrB03 | 5 | CH_bca_1701 | 4 | 5 | 0.000335021 |
| Beta vulgaris | Chr6_EL10_PGA_scaffold0 | 5 | CH_bvu_538 | 3 | 3 | 0.000944733 |
| Cannabis sativa | NC_044371.1 | 5 | CH_cansat_170 | 5 | 5 | 0.0000000187096 |
| Cannabis sativa | NC_044374.1 | 5 | CH_cansat_344 | 4 | 5 | 0.0000263039 |
| Capsicum annuum | PGAv.1.6.scaffold532 | 5 | CH_can_318 | 5 | 5 | 0.000000260433 |
| Capsicum annuum | PGAv.1.6.scaffold379 | 5 | CH_can_50 | 13 | 17 | 1.21644e-21 |
| Capsicum annuum | PGAv.1.6.scaffold529 | 5 | CH_can_91 | 9 | 9 | 3.89233e-16 |
| Corylus avellana | 4 | 5 | CH_cav_414 | 4 | 4 | 0.0000201364 |
| Carpinus fangiana | Cfa05 | 5 | CH_cfa_188 | 5 | 5 | 0.0000000195484 |
| Daucus carota | DCARv2_Chr3 | 5 | CH_dca_109 | 7 | 8 | 0.000000000140907 |
| Daucus carota | DCARv2_Chr5 | 5 | CH_dca_224 | 6 | 9 | 0.000000223765 |
| Daucus carota | DCARv2_Chr2 | 5 | CH_dca_290 | 5 | 6 | 0.00000246076 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 5 | CH_eca_254 | 5 | 5 | 0.0000000627418 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 5 | CH_eca_62 | 8 | 10 | 0.000000000000203738 |
| Eucalyptus grandis | Chr01 | 5 | CH_egr_83 | 14 | 16 | 2.87442e-27 |
| Erythranthe guttata | scaffold_6 | 5 | CH_egut_278 | 5 | 5 | 0.0000000979121 |
| Gossypium hirsutum | A12 | 5 | CH_ghi_1311 | 4 | 5 | 0.000868502 |
| Gossypium hirsutum | D12 | 5 | CH_ghi_1312 | 4 | 5 | 0.000868502 |
| Gossypium hirsutum | A08 | 5 | CH_ghi_985 | 4 | 4 | 0.000174669 |
| Gossypium hirsutum | D08 | 5 | CH_ghi_986 | 4 | 4 | 0.000174669 |
| Gossypium raimondii | Chr08 | 5 | CH_gra_375 | 5 | 7 | 0.0000145392 |
| Gossypium raimondii | Chr01 | 5 | CH_gra_451 | 4 | 4 | 0.0000986231 |
| Gossypium raimondii | Chr04 | 5 | CH_gra_452 | 4 | 4 | 0.0000986231 |
| Helianthus annuus | HanXRQChr02 | 5 | CH_han_209 | 9 | 17 | 0.00000000000700126 |
| Lotus japonicus | chr4 | 5 | CH_lja_326 | 5 | 8 | 0.0000107004 |
| Lonicera japonica | GWHAAZE00000001 | 5 | CH_lonja_171 | 8 | 8 | 0.0000000000000169207 |
| Lonicera japonica | GWHAAZE00000004 | 5 | CH_lonja_440 | 5 | 5 | 0.000000128226 |
| Lonicera japonica | GWHAAZE00000002 | 5 | CH_lonja_673 | 4 | 4 | 0.0000248944 |
| Lactuca sativa | Lsat_1_v8_lg_9 | 5 | CH_lsa_213 | 8 | 16 | 0.000000000493712 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 5 | CH_lsa_375 | 5 | 5 | 0.000000230006 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 5 | CH_lsa_428 | 6 | 12 | 0.00000115691 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 5 | CH_lsa_727 | 4 | 5 | 0.000203386 |
| Magnolia biondii | Chr04 | 5 | CH_mbi_125 | 11 | 48 | 0.0000000000000758159 |
| Manihot esculenta | Chromosome02 | 5 | CH_mes_701 | 4 | 6 | 0.00061774 |
| Medicago truncatula | chr5 | 5 | CH_mtr_1022 | 4 | 5 | 0.0000984528 |
| Medicago truncatula | chr1 | 5 | CH_mtr_1023 | 4 | 5 | 0.0000984528 |
| Medicago truncatula | chr4 | 5 | CH_mtr_1217 | 4 | 6 | 0.000294304 |
| Medicago truncatula | chr6 | 5 | CH_mtr_136 | 12 | 29 | 1.26497e-16 |
| Medicago truncatula | chr2 | 5 | CH_mtr_866 | 4 | 4 | 0.0000197611 |
| Nelumbo nucifera | chr1 | 5 | CH_nnu_343 | 4 | 5 | 0.0000202066 |
| Nicotiana tabacum | Nitab4.5_0002211 | 5 | CH_nta_147 | 4 | 4 | 0.0000115739 |
| Olea europaea | chr13 | 5 | CH_oeu_508 | 4 | 6 | 0.00028095 |
| Oryza sativa ssp. japonica | chr04 | 5 | CH_osa_614 | 5 | 20 | 0.000238918 |
| Petunia axillaris | Peaxi162Scf00071 | 5 | CH_pax_25 | 10 | 11 | 1.47775e-17 |
| Petunia axillaris | Peaxi162Scf00382 | 5 | CH_pax_269 | 5 | 6 | 0.0000012605 |
| Petunia axillaris | Peaxi162Scf00648 | 5 | CH_pax_332 | 5 | 8 | 0.0000116496 |
| Petunia axillaris | Peaxi162Scf00271 | 5 | CH_pax_370 | 4 | 4 | 0.000035933 |
| Punica granatum | NC_045127.1 | 5 | CH_pgr_166 | 6 | 7 | 0.00000000335091 |
| Pisum sativum | chr1LG6 | 5 | CH_psa_353 | 5 | 10 | 0.00000842733 |
| Pisum sativum | chr4LG4 | 5 | CH_psa_410 | 4 | 5 | 0.0000441758 |
| Papaver somniferum | NC_039368.1 | 5 | CH_pso_4 | 20 | 28 | 3.23507e-40 |
| Papaver somniferum | NW_020625487.1 | 5 | CH_pso_42 | 12 | 19 | 1.4864e-21 |
| Papaver somniferum | NC_039359.1 | 5 | CH_pso_817 | 4 | 6 | 0.0000328353 |
| Papaver somniferum | NW_020624376.1 | 5 | CH_pso_818 | 4 | 5 | 0.0000328353 |
| Papaver somniferum | NW_020627707.1 | 5 | CH_pso_819 | 4 | 5 | 0.0000328353 |
| Quercus lobata | 6 | 5 | CH_qlo_379 | 8 | 11 | 0.00000000000070138 |
| Quercus lobata | 6 | 5 | CH_qlo_452 | 8 | 14 | 0.0000000000126232 |
| Quercus lobata | 9 | 5 | CH_qlo_565 | 7 | 12 | 0.000000000799077 |
| Quercus lobata | 8 | 5 | CH_qlo_960 | 5 | 7 | 0.00000120268 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 5 | CH_rch_586 | 8 | 54 | 0.000000157617 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 5 | CH_rch_588 | 6 | 16 | 0.00000018134 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_857 | 5 | 13 | 0.0000107259 |
| Rhododendron simsii | chr07 | 5 | CH_rsi_446 | 6 | 12 | 0.000000428466 |
| Salvia bowleyana | GWHASIU00000007 | 5 | CH_sbo_260 | 6 | 10 | 0.0000000289039 |
| Salix brachista | GWHAAZH00000003 | 5 | CH_sbr_223 | 7 | 14 | 0.0000000311346 |
| Sequoiadendron giganteum | chr9 | 5 | CH_sgi_2520 | 4 | 8 | 0.000713775 |
| Sequoiadendron giganteum | chr10 | 5 | CH_sgi_368 | 9 | 14 | 0.0000000000000177121 |
| Sequoiadendron giganteum | chr9 | 5 | CH_sgi_702 | 7 | 12 | 0.000000000476083 |
| Solanum lycopersicum | SL4.0ch03 | 5 | CH_sly_515 | 4 | 4 | 0.0000203747 |
| Solanum pennellii | Spenn-ch03 | 5 | CH_spe_408 | 5 | 9 | 0.00000383793 |
| Solanum tuberosum | ST4.03ch01 | 5 | CH_stu_233 | 6 | 6 | 0.000000000907358 |
| Solanum tuberosum | ST4.03ch08 | 5 | CH_stu_359 | 5 | 5 | 0.000000171887 |
| Solanum tuberosum | ST4.03ch03 | 5 | CH_stu_409 | 5 | 6 | 0.00000102676 |
| Solanum tuberosum | ST4.03ch08 | 5 | CH_stu_548 | 4 | 4 | 0.0000324053 |
| Trochodendron aralioides | group15 | 5 | CH_tar_147 | 6 | 6 | 0.00000000136095 |
| Trochodendron aralioides | group0 | 5 | CH_tar_218 | 6 | 8 | 0.0000000377288 |
| Trochodendron aralioides | group12 | 5 | CH_tar_287 | 5 | 5 | 0.000000234881 |
| Trochodendron aralioides | group1 | 5 | CH_tar_726 | 4 | 5 | 0.000200701 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 5 | CH_tpr_69 | 8 | 12 | 0.00000000000428086 |
| Vitis vinifera | chr16 | 5 | CH_vvi_56 | 11 | 16 | 1.54147e-19 |
| Zea mays | 1 | 5 | CH_zma_30 | 10 | 11 | 1.66067e-17 |
| Zea mays | 7 | 5 | CH_zma_322 | 4 | 4 | 0.0000447618 |
| Actinidia chinensis | Lachesis_group23 | 6 | CH_ach_242 | 4 | 4 | 0.0000343626 |
| Aquilegia oxysepala | CHR07 | 6 | CH_aox_244 | 4 | 4 | 0.00000492708 |
| Brassica carinata | ChrB03 | 6 | CH_bca_1701 | 4 | 5 | 0.000335021 |
| Beta vulgaris | Chr6_EL10_PGA_scaffold0 | 6 | CH_bvu_538 | 3 | 3 | 0.000944733 |
| Cannabis sativa | NC_044371.1 | 6 | CH_cansat_170 | 5 | 5 | 0.0000000187096 |
| Cannabis sativa | NC_044374.1 | 6 | CH_cansat_344 | 4 | 5 | 0.0000263039 |
| Capsicum annuum | PGAv.1.6.scaffold532 | 6 | CH_can_318 | 5 | 5 | 0.000000260433 |
| Capsicum annuum | PGAv.1.6.scaffold379 | 6 | CH_can_50 | 13 | 17 | 1.21644e-21 |
| Capsicum annuum | PGAv.1.6.scaffold529 | 6 | CH_can_91 | 9 | 9 | 3.89233e-16 |
| Corylus avellana | 4 | 6 | CH_cav_414 | 4 | 4 | 0.0000201364 |
| Carpinus fangiana | Cfa05 | 6 | CH_cfa_188 | 5 | 5 | 0.0000000195484 |
| Daucus carota | DCARv2_Chr3 | 6 | CH_dca_109 | 7 | 8 | 0.000000000140907 |
| Daucus carota | DCARv2_Chr5 | 6 | CH_dca_224 | 6 | 9 | 0.000000223765 |
| Daucus carota | DCARv2_Chr2 | 6 | CH_dca_290 | 5 | 6 | 0.00000246076 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 6 | CH_eca_254 | 5 | 5 | 0.0000000627418 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 6 | CH_eca_62 | 8 | 10 | 0.000000000000203738 |
| Eucalyptus grandis | Chr01 | 6 | CH_egr_83 | 14 | 16 | 2.87442e-27 |
| Erythranthe guttata | scaffold_6 | 6 | CH_egut_278 | 5 | 5 | 0.0000000979121 |
| Fragaria x ananassa | Fvb7-2 | 6 | CH_fan_826 | 5 | 11 | 0.000103368 |
| Gossypium hirsutum | A12 | 6 | CH_ghi_1311 | 4 | 5 | 0.000868502 |
| Gossypium hirsutum | D12 | 6 | CH_ghi_1312 | 4 | 5 | 0.000868502 |
| Gossypium hirsutum | A08 | 6 | CH_ghi_985 | 4 | 4 | 0.000174669 |
| Gossypium hirsutum | D08 | 6 | CH_ghi_986 | 4 | 4 | 0.000174669 |
| Gossypium raimondii | Chr08 | 6 | CH_gra_375 | 5 | 7 | 0.0000145392 |
| Gossypium raimondii | Chr01 | 6 | CH_gra_451 | 4 | 4 | 0.0000986231 |
| Gossypium raimondii | Chr04 | 6 | CH_gra_452 | 4 | 4 | 0.0000986231 |
| Helianthus annuus | HanXRQChr02 | 6 | CH_han_209 | 9 | 17 | 0.00000000000700126 |
| Lotus japonicus | chr4 | 6 | CH_lja_326 | 5 | 8 | 0.0000107004 |
| Lonicera japonica | GWHAAZE00000001 | 6 | CH_lonja_171 | 8 | 8 | 0.0000000000000169207 |
| Lonicera japonica | GWHAAZE00000004 | 6 | CH_lonja_440 | 5 | 5 | 0.000000128226 |
| Lonicera japonica | GWHAAZE00000002 | 6 | CH_lonja_673 | 4 | 4 | 0.0000248944 |
| Lactuca sativa | Lsat_1_v8_lg_9 | 6 | CH_lsa_213 | 8 | 16 | 0.000000000493712 |
| Lactuca sativa | Lsat_1_v8_lg_4 | 6 | CH_lsa_375 | 5 | 5 | 0.000000230006 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 6 | CH_lsa_428 | 6 | 12 | 0.00000115691 |
| Lactuca sativa | Lsat_1_v8_lg_8 | 6 | CH_lsa_727 | 4 | 5 | 0.000203386 |
| Magnolia biondii | Chr04 | 6 | CH_mbi_125 | 11 | 48 | 0.0000000000000758159 |
| Manihot esculenta | Chromosome02 | 6 | CH_mes_701 | 4 | 6 | 0.00061774 |
| Medicago truncatula | chr5 | 6 | CH_mtr_1022 | 4 | 5 | 0.0000984528 |
| Medicago truncatula | chr1 | 6 | CH_mtr_1023 | 4 | 5 | 0.0000984528 |
| Medicago truncatula | chr4 | 6 | CH_mtr_1217 | 4 | 6 | 0.000294304 |
| Medicago truncatula | chr6 | 6 | CH_mtr_136 | 12 | 29 | 1.26497e-16 |
| Medicago truncatula | chr2 | 6 | CH_mtr_866 | 4 | 4 | 0.0000197611 |
| Nelumbo nucifera | chr1 | 6 | CH_nnu_343 | 4 | 5 | 0.0000202066 |
| Nicotiana tabacum | Nitab4.5_0002211 | 6 | CH_nta_147 | 4 | 4 | 0.0000115739 |
| Olea europaea | chr13 | 6 | CH_oeu_508 | 4 | 6 | 0.00028095 |
| Oryza sativa ssp. japonica | chr04 | 6 | CH_osa_614 | 5 | 20 | 0.000238918 |
| Petunia axillaris | Peaxi162Scf00071 | 6 | CH_pax_25 | 10 | 11 | 1.47775e-17 |
| Petunia axillaris | Peaxi162Scf00382 | 6 | CH_pax_269 | 5 | 6 | 0.0000012605 |
| Petunia axillaris | Peaxi162Scf00648 | 6 | CH_pax_332 | 5 | 8 | 0.0000116496 |
| Petunia axillaris | Peaxi162Scf00271 | 6 | CH_pax_370 | 4 | 4 | 0.000035933 |
| Punica granatum | NC_045127.1 | 6 | CH_pgr_166 | 6 | 7 | 0.00000000335091 |
| Pisum sativum | chr1LG6 | 6 | CH_psa_353 | 5 | 10 | 0.00000842733 |
| Pisum sativum | chr4LG4 | 6 | CH_psa_410 | 4 | 5 | 0.0000441758 |
| Papaver somniferum | NC_039368.1 | 6 | CH_pso_4 | 20 | 28 | 3.23507e-40 |
| Papaver somniferum | NW_020625487.1 | 6 | CH_pso_42 | 12 | 19 | 1.4864e-21 |
| Papaver somniferum | NC_039359.1 | 6 | CH_pso_817 | 4 | 6 | 0.0000328353 |
| Papaver somniferum | NW_020624376.1 | 6 | CH_pso_818 | 4 | 5 | 0.0000328353 |
| Papaver somniferum | NW_020627707.1 | 6 | CH_pso_819 | 4 | 5 | 0.0000328353 |
| Quercus lobata | 6 | 6 | CH_qlo_379 | 8 | 11 | 0.00000000000070138 |
| Quercus lobata | 6 | 6 | CH_qlo_452 | 8 | 14 | 0.0000000000126232 |
| Quercus lobata | 9 | 6 | CH_qlo_565 | 7 | 12 | 0.000000000799077 |
| Quercus lobata | 8 | 6 | CH_qlo_960 | 5 | 7 | 0.00000120268 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 6 | CH_rch_586 | 8 | 54 | 0.000000157617 |
| Rosa chinensis | RcHm_v2.0_Chr7 | 6 | CH_rch_588 | 6 | 16 | 0.00000018134 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_857 | 5 | 13 | 0.0000107259 |
| Rhododendron simsii | chr07 | 6 | CH_rsi_446 | 6 | 12 | 0.000000428466 |
| Salvia bowleyana | GWHASIU00000007 | 6 | CH_sbo_260 | 6 | 10 | 0.0000000289039 |
| Salix brachista | GWHAAZH00000003 | 6 | CH_sbr_223 | 7 | 14 | 0.0000000311346 |
| Sequoiadendron giganteum | chr9 | 6 | CH_sgi_2520 | 4 | 8 | 0.000713775 |
| Sequoiadendron giganteum | chr10 | 6 | CH_sgi_368 | 9 | 14 | 0.0000000000000177121 |
| Sequoiadendron giganteum | chr9 | 6 | CH_sgi_702 | 7 | 12 | 0.000000000476083 |
| Solanum lycopersicum | SL4.0ch03 | 6 | CH_sly_515 | 4 | 4 | 0.0000203747 |
| Solanum pennellii | Spenn-ch03 | 6 | CH_spe_408 | 5 | 9 | 0.00000383793 |
| Solanum tuberosum | ST4.03ch01 | 6 | CH_stu_233 | 6 | 6 | 0.000000000907358 |
| Solanum tuberosum | ST4.03ch08 | 6 | CH_stu_359 | 5 | 5 | 0.000000171887 |
| Solanum tuberosum | ST4.03ch03 | 6 | CH_stu_409 | 5 | 6 | 0.00000102676 |
| Solanum tuberosum | ST4.03ch08 | 6 | CH_stu_548 | 4 | 4 | 0.0000324053 |
| Trochodendron aralioides | group15 | 6 | CH_tar_147 | 6 | 6 | 0.00000000136095 |
| Trochodendron aralioides | group0 | 6 | CH_tar_218 | 6 | 8 | 0.0000000377288 |
| Trochodendron aralioides | group12 | 6 | CH_tar_287 | 5 | 5 | 0.000000234881 |
| Trochodendron aralioides | group1 | 6 | CH_tar_726 | 4 | 5 | 0.000200701 |
| Trifolium pratense | Tp57577_TGAC_v2_LG2 | 6 | CH_tpr_69 | 8 | 12 | 0.00000000000428086 |
| Vitis vinifera | chr16 | 6 | CH_vvi_56 | 11 | 16 | 1.54147e-19 |
| Zea mays | 1 | 6 | CH_zma_30 | 10 | 11 | 1.66067e-17 |
| Zea mays | 7 | 6 | CH_zma_322 | 4 | 4 | 0.0000447618 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |