Functional clusters

Information

  • Type InterPro
  • Description Aspartic peptidase A1 family

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-8 5 CH_aar_147 5 8 0.000000100659
Aethionema arabicum LG-11 5 CH_aar_35 9 11 2.37304e-18
Aethionema arabicum LG-5 5 CH_aar_363 3 3 0.000327561
Acer truncatum chr7 5 CH_acertr_204 5 6 0.00000000991701
Acer truncatum chr8 5 CH_acertr_822 3 3 0.000341141
Acer truncatum chr4 5 CH_acertr_9 11 11 1.27142e-25
Acer truncatum chr11 5 CH_acertr_937 6 73 0.000535515
Actinidia chinensis Lachesis_group22 5 CH_ach_407 3 3 0.000167403
Arabidopsis lyrata scaffold_6 5 CH_aly_260 4 4 0.000000481279
Aquilegia oxysepala CHR05 5 CH_aox_376 3 3 0.000146459
Aquilegia oxysepala CHR05 5 CH_aox_80 6 11 0.000000000320891
Arabidopsis thaliana Chr3 5 CH_ath_185 4 4 0.0000000240603
Brassica carinata ChrB08 5 CH_bca_105 8 13 0.0000000000000352417
Brassica carinata ChrB08 5 CH_bca_111 7 8 0.000000000000110381
Brassica carinata ChrC04 5 CH_bca_15 12 15 1.89117e-25
Brassica carinata ChrC04 5 CH_bca_353 5 5 0.00000000340483
Brassica napus C09 5 CH_bna_20 12 17 5.75249e-24
Brassica napus C09 5 CH_bna_273 6 9 0.000000000908517
Brassica napus A10 5 CH_bna_389 5 6 0.000000030513
Brassica napus A10 5 CH_bna_42 9 10 1.0286e-18
Brassica oleracea C9 5 CH_bol_18 11 22 3.96653e-20
Camellia sinensis var. sinensis Chr1 5 CH_camsi_1242 3 3 0.000279323
Capsicum annuum PGAv.1.6.scaffold183 5 CH_can_184 7 14 0.000000000534438
Capsicum annuum PGAv.1.6.scaffold1618 5 CH_can_75 10 15 1.69855e-17
Cicer arietinum L. Ca_LG4_v3 5 CH_car_153 7 61 0.000011002
Cicer arietinum L. Ca_LG6_v3 5 CH_car_85 6 19 0.000000288241
Coffea canephora chr1 5 CH_ccan_417 3 9 0.0000704812
Ceratophyllum demersum 11 5 CH_cde_44 6 12 0.00000000429165
Carpinus fangiana Cfa06 5 CH_cfa_310 4 5 0.00000339474
Carpinus fangiana Cfa07 5 CH_cfa_569 4 13 0.000478638
Cardamine hirsuta Chr5 5 CH_chi_295 4 4 0.000000391376
Cardamine hirsuta Chr6 5 CH_chi_654 3 3 0.000209698
Cardamine hirsuta Chr6 5 CH_chi_70 7 7 0.00000000000000227171
Cardamine hirsuta Chr6 5 CH_chi_812 3 4 0.000837588
Carya illinoinensis Chr08 5 CH_cil_183 7 14 0.0000000000201404
Carica papaya supercontig_39 5 CH_cpa_131 4 4 0.000000134977
Chenopodium quinoa C_Quinoa_Scaffold_4336 5 CH_cqu_303 5 8 0.0000000778467
Capsella rubella scaffold_6 5 CH_cru_281 4 4 0.000000463238
Capsella rubella scaffold_6 5 CH_cru_554 3 3 0.000234639
Capsella rubella scaffold_5 5 CH_cru_555 3 3 0.000234639
Cucumis sativus L. chr6 5 CH_csa_375 3 3 0.000204875
Cucumis sativus L. chr1 5 CH_csa_376 3 3 0.000204875
Daucus carota DCARv2_Chr5 5 CH_dca_466 4 8 0.000114719
Daucus carota DCARv2_Chr7 5 CH_dca_86 6 6 0.0000000000111661
Davidia involucrata GWHABJS00000017 5 CH_din_604 4 11 0.000157277
Davidia involucrata GWHABJS00000002 5 CH_din_627 3 3 0.000263763
Davidia involucrata GWHABJS00000014 5 CH_din_70 7 7 0.00000000000000269509
Eucalyptus grandis Chr08 5 CH_egr_1108 4 8 0.0000767936
Eucalyptus grandis Chr02 5 CH_egr_262 8 10 0.00000000000000131086
Eucalyptus grandis Chr07 5 CH_egr_448 6 7 0.0000000000407577
Eucalyptus grandis Chr07 5 CH_egr_621 5 6 0.0000000153038
Eucalyptus grandis Chr08 5 CH_egr_827 4 4 0.00000110533
Eucalyptus grandis Chr08 5 CH_egr_828 4 4 0.00000110533
Erythranthe guttata scaffold_8 5 CH_egut_223 5 5 0.0000000073441
Erythranthe guttata scaffold_7 5 CH_egut_224 5 5 0.0000000073441
Erythranthe guttata scaffold_14 5 CH_egut_25 16 22 3.90703e-32
Eutrema salsugineum scaffold_2 5 CH_esa_191 4 4 0.000000331089
Eutrema salsugineum scaffold_16 5 CH_esa_382 3 3 0.000181147
Fragaria vesca Fvb4 5 CH_fve_355 5 12 0.000000354835
Gossypium hirsutum A05 5 CH_ghi_568 4 4 0.000000778693
Gossypium hirsutum D05 5 CH_ghi_569 4 4 0.000000778693
Glycine max Gm13 5 CH_gma_920 3 3 0.000720422
Glycine max Gm15 5 CH_gma_921 3 3 0.000720422
Glycine max Gm17 5 CH_gma_922 3 3 0.000720422
Gossypium raimondii Chr09 5 CH_gra_293 4 4 0.000000531918
Hydrangea macrophylla Hma1.2p1_0995F.1 5 CH_hma_260 3 3 0.0000606431
Lupinus albus Lalb_Chr21 5 CH_lal_280 6 26 0.00000195585
Lupinus albus Lalb_Chr08 5 CH_lal_433 5 20 0.0000551488
Lotus japonicus chr6 5 CH_lja_49 7 9 0.00000000000045279
Lonicera japonica GWHAAZE00000008 5 CH_lonja_1194 3 3 0.000818263
Lonicera japonica GWHAAZE00000007 5 CH_lonja_356 5 5 0.00000000655271
Lonicera japonica GWHAAZE00000003 5 CH_lonja_8 22 23 1.16107e-51
Magnolia biondii Chr19 5 CH_mbi_517 4 6 0.000000917923
Malus domestica Chr17 5 CH_mdo_270 6 11 0.000000000617015
Malus domestica Chr16 5 CH_mdo_624 4 5 0.00000238512
Manihot esculenta Chromosome16 5 CH_mes_605 3 3 0.00028031
Manihot esculenta Chromosome03 5 CH_mes_99 7 7 0.00000000000000395955
Medicago truncatula chr2 5 CH_mtr_84 10 14 3.39481e-21
Oryza sativa ssp. japonica chr05 5 CH_osa_363 4 5 0.00000425626
Oryza sativa ssp. japonica chr06 5 CH_osa_606 5 29 0.000205059
Petunia axillaris Peaxi162Scf00196 5 CH_pax_42 7 9 0.0000000000000795367
Punica granatum NC_045132.1 5 CH_pgr_164 6 12 0.00000000332381
Prunus persica Pp01 5 CH_ppe_715 3 3 0.000300416
Pisum sativum chr5LG3 5 CH_psa_665 3 4 0.000503218
Papaver somniferum NC_039358.1 5 CH_pso_245 7 16 0.0000000000412738
Papaver somniferum NC_039358.1 5 CH_pso_370 5 6 0.00000000782651
Papaver somniferum NC_039358.1 5 CH_pso_54 11 22 1.83115e-20
Papaver somniferum NC_039366.1 5 CH_pso_565 4 4 0.000000773045
Papaver somniferum NC_039362.1 5 CH_pso_727 4 6 0.0000115641
Populus trichocarpa Chr18 5 CH_ptr_183 6 8 0.0000000000750551
Populus trichocarpa Chr06 5 CH_ptr_655 3 3 0.000324861
Phaseolus vulgaris Chr06 5 CH_pvu_346 4 5 0.00000455194
Quercus lobata 6 5 CH_qlo_1186 4 7 0.0000367261
Quercus lobata 4 5 CH_qlo_1664 3 3 0.000469734
Quercus lobata 6 5 CH_qlo_36 15 15 3.50287e-36
Quercus lobata 10 5 CH_qlo_600 5 5 0.00000000234235
Quercus lobata 7 5 CH_qlo_946 4 4 0.00000105501
Rosa chinensis RcHm_v2.0_Chr4 5 CH_rch_543 5 10 0.0000000574641
Rhododendron simsii chr02 5 CH_rsi_193 6 6 0.00000000000208031
Striga asiatica scaffold1 5 CH_sas_190 3 3 0.000321133
Striga asiatica scaffold24 5 CH_sas_62 4 4 0.000000672815
Salvia bowleyana GWHASIU00000007 5 CH_sbo_192 5 5 0.0000000000681037
Salix brachista GWHAAZH00000018 5 CH_sbr_78 7 7 0.00000000000000887661
Sequoiadendron giganteum chr3 5 CH_sgi_1206 4 4 0.000000494759
Sequoiadendron giganteum chr5 5 CH_sgi_491 6 6 0.00000000000158595
Schrenkiella parvula ch6-6 5 CH_spa_133 4 4 0.000000463117
Schrenkiella parvula ch5-1 5 CH_spa_274 3 3 0.00023065
Solanum pennellii Spenn-ch01 5 CH_spe_12 12 14 7.48485e-28
Solanum pennellii Spenn-ch07 5 CH_spe_874 3 4 0.00080058
Solanum tuberosum ST4.03ch07 5 CH_stu_83 8 9 2.23296e-16
Trochodendron aralioides group2 5 CH_tar_175 5 7 0.00000000854635
Trochodendron aralioides group17 5 CH_tar_603 3 3 0.000158202
Theobroma cacao Chromosome_8 5 CH_tca_638 3 3 0.000223039
Theobroma cacao Chromosome_4 5 CH_tca_84 7 7 0.00000000000000282009
Tarenaya hassleriana NW_010966177.1 5 CH_tha_126 4 4 0.000000736847
Tarenaya hassleriana NW_010966177.1 5 CH_tha_278 3 3 0.000334879
Tarenaya hassleriana NW_010970490.1 5 CH_tha_35 6 6 0.0000000000033997
Trifolium pratense Tp57577_TGAC_v2_LG7 5 CH_tpr_367 4 6 0.00000948619
Tripterygium wilfordii NC_052246.1 5 CH_twi_278 4 5 0.00000693375
Tripterygium wilfordii NC_052235.1 5 CH_twi_507 3 3 0.000566404
Utricularia gibba unitig_899 5 CH_ugi_224 3 3 0.000197925
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_55 7 7 0.00000000000000319086
Aethionema arabicum LG-8 6 CH_aar_147 5 8 0.000000100659
Aethionema arabicum LG-11 6 CH_aar_35 9 11 2.37304e-18
Aethionema arabicum LG-5 6 CH_aar_363 3 3 0.000327561
Acer truncatum chr7 6 CH_acertr_204 5 6 0.00000000991701
Acer truncatum chr8 6 CH_acertr_822 3 3 0.000341141
Acer truncatum chr4 6 CH_acertr_9 11 11 1.27142e-25
Acer truncatum chr11 6 CH_acertr_937 6 73 0.000535515
Actinidia chinensis Lachesis_group22 6 CH_ach_407 3 3 0.000167403
Arabidopsis lyrata scaffold_6 6 CH_aly_260 4 4 0.000000481279
Aquilegia oxysepala CHR05 6 CH_aox_376 3 3 0.000146459
Aquilegia oxysepala CHR05 6 CH_aox_80 6 11 0.000000000320891
Arabidopsis thaliana Chr3 6 CH_ath_185 4 4 0.0000000240603
Brassica carinata ChrB08 6 CH_bca_105 8 13 0.0000000000000352417
Brassica carinata ChrB08 6 CH_bca_111 7 8 0.000000000000110381
Brassica carinata ChrC04 6 CH_bca_15 12 15 1.89117e-25
Brassica carinata ChrC04 6 CH_bca_353 5 5 0.00000000340483
Brassica napus C09 6 CH_bna_20 12 17 5.75249e-24
Brassica napus C09 6 CH_bna_273 6 9 0.000000000908517
Brassica napus A10 6 CH_bna_389 5 6 0.000000030513
Brassica napus A10 6 CH_bna_42 9 10 1.0286e-18
Brassica oleracea C9 6 CH_bol_18 11 22 3.96653e-20
Camellia sinensis var. sinensis Chr1 6 CH_camsi_1242 3 3 0.000279323
Capsicum annuum PGAv.1.6.scaffold183 6 CH_can_184 7 14 0.000000000534438
Capsicum annuum PGAv.1.6.scaffold1618 6 CH_can_75 10 15 1.69855e-17
Cicer arietinum L. Ca_LG4_v3 6 CH_car_153 7 61 0.000011002
Cicer arietinum L. Ca_LG6_v3 6 CH_car_85 6 19 0.000000288241
Coffea canephora chr1 6 CH_ccan_417 3 9 0.0000704812
Ceratophyllum demersum 11 6 CH_cde_44 6 12 0.00000000429165
Carpinus fangiana Cfa06 6 CH_cfa_310 4 5 0.00000339474
Carpinus fangiana Cfa07 6 CH_cfa_569 4 13 0.000478638
Cardamine hirsuta Chr5 6 CH_chi_295 4 4 0.000000391376
Cardamine hirsuta Chr6 6 CH_chi_654 3 3 0.000209698
Cardamine hirsuta Chr6 6 CH_chi_70 7 7 0.00000000000000227171
Cardamine hirsuta Chr6 6 CH_chi_812 3 4 0.000837588
Carya illinoinensis Chr08 6 CH_cil_183 7 14 0.0000000000201404
Carica papaya supercontig_39 6 CH_cpa_131 4 4 0.000000134977
Chenopodium quinoa C_Quinoa_Scaffold_4336 6 CH_cqu_303 5 8 0.0000000778467
Capsella rubella scaffold_6 6 CH_cru_281 4 4 0.000000463238
Capsella rubella scaffold_6 6 CH_cru_554 3 3 0.000234639
Capsella rubella scaffold_5 6 CH_cru_555 3 3 0.000234639
Cucumis sativus L. chr6 6 CH_csa_375 3 3 0.000204875
Cucumis sativus L. chr1 6 CH_csa_376 3 3 0.000204875
Daucus carota DCARv2_Chr5 6 CH_dca_466 4 8 0.000114719
Daucus carota DCARv2_Chr7 6 CH_dca_86 6 6 0.0000000000111661
Davidia involucrata GWHABJS00000017 6 CH_din_604 4 11 0.000157277
Davidia involucrata GWHABJS00000002 6 CH_din_627 3 3 0.000263763
Davidia involucrata GWHABJS00000014 6 CH_din_70 7 7 0.00000000000000269509
Eucalyptus grandis Chr08 6 CH_egr_1108 4 8 0.0000767936
Eucalyptus grandis Chr02 6 CH_egr_262 8 10 0.00000000000000131086
Eucalyptus grandis Chr07 6 CH_egr_448 6 7 0.0000000000407577
Eucalyptus grandis Chr07 6 CH_egr_621 5 6 0.0000000153038
Eucalyptus grandis Chr08 6 CH_egr_827 4 4 0.00000110533
Eucalyptus grandis Chr08 6 CH_egr_828 4 4 0.00000110533
Erythranthe guttata scaffold_8 6 CH_egut_223 5 5 0.0000000073441
Erythranthe guttata scaffold_7 6 CH_egut_224 5 5 0.0000000073441
Erythranthe guttata scaffold_14 6 CH_egut_25 16 22 3.90703e-32
Eutrema salsugineum scaffold_2 6 CH_esa_191 4 4 0.000000331089
Eutrema salsugineum scaffold_16 6 CH_esa_382 3 3 0.000181147
Fragaria x ananassa Fvb4-3 6 CH_fan_26 12 35 1.8226e-19
Fragaria vesca Fvb4 6 CH_fve_355 5 12 0.000000354835
Gossypium hirsutum A05 6 CH_ghi_568 4 4 0.000000778693
Gossypium hirsutum D05 6 CH_ghi_569 4 4 0.000000778693
Glycine max Gm13 6 CH_gma_920 3 3 0.000720422
Glycine max Gm15 6 CH_gma_921 3 3 0.000720422
Glycine max Gm17 6 CH_gma_922 3 3 0.000720422
Gossypium raimondii Chr09 6 CH_gra_293 4 4 0.000000531918
Hydrangea macrophylla Hma1.2p1_0995F.1 6 CH_hma_260 3 3 0.0000606431
Lupinus albus Lalb_Chr21 6 CH_lal_280 6 26 0.00000195585
Lupinus albus Lalb_Chr08 6 CH_lal_433 5 20 0.0000551488
Lotus japonicus chr6 6 CH_lja_49 7 9 0.00000000000045279
Lonicera japonica GWHAAZE00000008 6 CH_lonja_1194 3 3 0.000818263
Lonicera japonica GWHAAZE00000007 6 CH_lonja_356 5 5 0.00000000655271
Lonicera japonica GWHAAZE00000003 6 CH_lonja_8 22 23 1.16107e-51
Magnolia biondii Chr19 6 CH_mbi_517 4 6 0.000000917923
Malus domestica Chr17 6 CH_mdo_270 6 11 0.000000000617015
Malus domestica Chr16 6 CH_mdo_624 4 5 0.00000238512
Manihot esculenta Chromosome16 6 CH_mes_605 3 3 0.00028031
Manihot esculenta Chromosome03 6 CH_mes_99 7 7 0.00000000000000395955
Medicago truncatula chr2 6 CH_mtr_84 10 14 3.39481e-21
Oryza sativa ssp. japonica chr05 6 CH_osa_363 4 5 0.00000425626
Oryza sativa ssp. japonica chr06 6 CH_osa_606 5 29 0.000205059
Petunia axillaris Peaxi162Scf00196 6 CH_pax_42 7 9 0.0000000000000795367
Punica granatum NC_045132.1 6 CH_pgr_164 6 12 0.00000000332381
Prunus persica Pp01 6 CH_ppe_715 3 3 0.000300416
Pisum sativum chr5LG3 6 CH_psa_665 3 4 0.000503218
Papaver somniferum NC_039358.1 6 CH_pso_245 7 16 0.0000000000412738
Papaver somniferum NC_039358.1 6 CH_pso_370 5 6 0.00000000782651
Papaver somniferum NC_039358.1 6 CH_pso_54 11 22 1.83115e-20
Papaver somniferum NC_039366.1 6 CH_pso_565 4 4 0.000000773045
Papaver somniferum NC_039362.1 6 CH_pso_727 4 6 0.0000115641
Populus trichocarpa Chr18 6 CH_ptr_183 6 8 0.0000000000750551
Populus trichocarpa Chr06 6 CH_ptr_655 3 3 0.000324861
Phaseolus vulgaris Chr06 6 CH_pvu_346 4 5 0.00000455194
Quercus lobata 6 6 CH_qlo_1186 4 7 0.0000367261
Quercus lobata 4 6 CH_qlo_1664 3 3 0.000469734
Quercus lobata 6 6 CH_qlo_36 15 15 3.50287e-36
Quercus lobata 10 6 CH_qlo_600 5 5 0.00000000234235
Quercus lobata 7 6 CH_qlo_946 4 4 0.00000105501
Rosa chinensis RcHm_v2.0_Chr4 6 CH_rch_543 5 10 0.0000000574641
Rhododendron simsii chr02 6 CH_rsi_193 6 6 0.00000000000208031
Striga asiatica scaffold1 6 CH_sas_190 3 3 0.000321133
Striga asiatica scaffold24 6 CH_sas_62 4 4 0.000000672815
Salvia bowleyana GWHASIU00000007 6 CH_sbo_192 5 5 0.0000000000681037
Salix brachista GWHAAZH00000018 6 CH_sbr_78 7 7 0.00000000000000887661
Sequoiadendron giganteum chr3 6 CH_sgi_1206 4 4 0.000000494759
Sequoiadendron giganteum chr5 6 CH_sgi_491 6 6 0.00000000000158595
Schrenkiella parvula ch6-6 6 CH_spa_133 4 4 0.000000463117
Schrenkiella parvula ch5-1 6 CH_spa_274 3 3 0.00023065
Solanum pennellii Spenn-ch01 6 CH_spe_12 12 14 7.48485e-28
Solanum pennellii Spenn-ch07 6 CH_spe_874 3 4 0.00080058
Solanum tuberosum ST4.03ch07 6 CH_stu_83 8 9 2.23296e-16
Trochodendron aralioides group2 6 CH_tar_175 5 7 0.00000000854635
Trochodendron aralioides group17 6 CH_tar_603 3 3 0.000158202
Theobroma cacao Chromosome_8 6 CH_tca_638 3 3 0.000223039
Theobroma cacao Chromosome_4 6 CH_tca_84 7 7 0.00000000000000282009
Tarenaya hassleriana NW_010966177.1 6 CH_tha_126 4 4 0.000000736847
Tarenaya hassleriana NW_010966177.1 6 CH_tha_278 3 3 0.000334879
Tarenaya hassleriana NW_010970490.1 6 CH_tha_35 6 6 0.0000000000033997
Trifolium pratense Tp57577_TGAC_v2_LG7 6 CH_tpr_367 4 6 0.00000948619
Tripterygium wilfordii NC_052246.1 6 CH_twi_278 4 5 0.00000693375
Tripterygium wilfordii NC_052235.1 6 CH_twi_507 3 3 0.000566404
Utricularia gibba unitig_899 6 CH_ugi_224 3 3 0.000197925
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_55 7 7 0.00000000000000319086

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001