Functional clusters
Information
- Type InterPro
- Description Heat shock protein Hsp90 family
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_344 | 5 | CH_aag_325 | 2 | 2 | 0.000481541 |
| Beta vulgaris | Chr1_EL10_PGA_scaffold3 | 5 | CH_bvu_288 | 4 | 22 | 0.0000101364 |
| Cardamine hirsuta | Chr8 | 5 | CH_chi_337 | 3 | 3 | 0.00000157667 |
| Davidia involucrata | GWHABJS00000002 | 5 | CH_din_332 | 3 | 3 | 0.0000021011 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 5 | CH_eca_383 | 4 | 28 | 0.00000273641 |
| Helianthus annuus | HanXRQChr03 | 5 | CH_han_592 | 3 | 4 | 0.00000256208 |
| Lupinus albus | Lalb_Chr04 | 5 | CH_lal_448 | 4 | 49 | 0.0000910112 |
| Nelumbo nucifera | chr6 | 5 | CH_nnu_73 | 5 | 6 | 0.00000000000492853 |
| Pisum sativum | chr2LG1 | 5 | CH_psa_273 | 3 | 3 | 0.000000673472 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 5 | CH_rch_741 | 3 | 3 | 0.00000162106 |
| Sapria himalayana | scaffold45_4472430 | 5 | CH_shi_225 | 3 | 3 | 0.0000179212 |
| Sapria himalayana | scaffold14_12630789 | 5 | CH_shi_226 | 3 | 3 | 0.0000179212 |
| Sapria himalayana | scaffold19_10581841 | 5 | CH_shi_227 | 3 | 3 | 0.0000179212 |
| Solanum lycopersicum | SL4.0ch04 | 5 | CH_sly_524 | 3 | 8 | 0.000024289 |
| Vanilla planifolia | CM028158.1 | 5 | CH_vpl_168 | 4 | 10 | 0.000000346178 |
| Anthoceros agrestis | Sc2ySwM_344 | 6 | CH_aag_325 | 2 | 2 | 0.000481541 |
| Beta vulgaris | Chr1_EL10_PGA_scaffold3 | 6 | CH_bvu_288 | 4 | 22 | 0.0000101364 |
| Cardamine hirsuta | Chr8 | 6 | CH_chi_337 | 3 | 3 | 0.00000157667 |
| Davidia involucrata | GWHABJS00000002 | 6 | CH_din_332 | 3 | 3 | 0.0000021011 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 6 | CH_eca_383 | 4 | 28 | 0.00000273641 |
| Helianthus annuus | HanXRQChr03 | 6 | CH_han_592 | 3 | 4 | 0.00000256208 |
| Lupinus albus | Lalb_Chr04 | 6 | CH_lal_448 | 4 | 49 | 0.0000910112 |
| Nelumbo nucifera | chr6 | 6 | CH_nnu_73 | 5 | 6 | 0.00000000000492853 |
| Pisum sativum | chr2LG1 | 6 | CH_psa_273 | 3 | 3 | 0.000000673472 |
| Rosa chinensis | RcHm_v2.0_Chr5 | 6 | CH_rch_741 | 3 | 3 | 0.00000162106 |
| Sapria himalayana | scaffold45_4472430 | 6 | CH_shi_225 | 3 | 3 | 0.0000179212 |
| Sapria himalayana | scaffold14_12630789 | 6 | CH_shi_226 | 3 | 3 | 0.0000179212 |
| Sapria himalayana | scaffold19_10581841 | 6 | CH_shi_227 | 3 | 3 | 0.0000179212 |
| Solanum lycopersicum | SL4.0ch04 | 6 | CH_sly_524 | 3 | 8 | 0.000024289 |
| Vanilla planifolia | CM028158.1 | 6 | CH_vpl_168 | 4 | 10 | 0.000000346178 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |