Functional clusters

Information

  • Type InterPro
  • Description Glycoside hydrolase, family 14B, plant

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group6 5 CH_ach_507 2 2 0.000543213
Corchorus olitorius AWUE01014940.1 5 CH_col_126 2 2 0.000292099
Carica papaya supercontig_18 5 CH_cpa_471 2 2 0.000285198
Daucus carota DCARv2_Chr7 5 CH_dca_666 2 2 0.000637775
Durio zibethinus NW_019168492.1 5 CH_dzi_529 2 2 0.000463489
Eucalyptus grandis Chr05 5 CH_egr_1266 2 2 0.000351165
Fragaria vesca Fvb7 5 CH_fve_698 2 2 0.000353461
Helianthus annuus HanXRQChr04 5 CH_han_1171 2 2 0.0008115
Helianthus annuus HanXRQChr04 5 CH_han_1172 2 2 0.0008115
Lonicera japonica GWHAAZE00000001 5 CH_lonja_293 4 5 0.000000000225518
Marchantia polymorpha scaffold_43 5 CH_mpo_206 2 2 0.000662654
Olea europaea chr19 5 CH_oeu_303 2 2 0.0000533789
Punica granatum NC_045130.1 5 CH_pgr_546 2 2 0.000450214
Prunus persica Pp02 5 CH_ppe_741 2 2 0.000447577
Quercus lobata 8 5 CH_qlo_1686 2 2 0.000516289
Salix brachista GWHAAZH00000014 5 CH_sbr_643 2 2 0.00063014
Selenicereus undatus Scaffold_2055 5 CH_sun_315 2 2 0.000435983
Tripterygium wilfordii NC_052249.1 5 CH_twi_519 2 2 0.00083626
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_772 2 2 0.000929238
Actinidia chinensis Lachesis_group6 6 CH_ach_507 2 2 0.000543213
Corchorus olitorius AWUE01014940.1 6 CH_col_126 2 2 0.000292099
Carica papaya supercontig_18 6 CH_cpa_471 2 2 0.000285198
Daucus carota DCARv2_Chr7 6 CH_dca_666 2 2 0.000637775
Durio zibethinus NW_019168492.1 6 CH_dzi_529 2 2 0.000463489
Eucalyptus grandis Chr05 6 CH_egr_1266 2 2 0.000351165
Fragaria vesca Fvb7 6 CH_fve_698 2 2 0.000353461
Helianthus annuus HanXRQChr04 6 CH_han_1171 2 2 0.0008115
Helianthus annuus HanXRQChr04 6 CH_han_1172 2 2 0.0008115
Lonicera japonica GWHAAZE00000001 6 CH_lonja_293 4 5 0.000000000225518
Marchantia polymorpha scaffold_43 6 CH_mpo_206 2 2 0.000662654
Olea europaea chr19 6 CH_oeu_303 2 2 0.0000533789
Punica granatum NC_045130.1 6 CH_pgr_546 2 2 0.000450214
Prunus persica Pp02 6 CH_ppe_741 2 2 0.000447577
Quercus lobata 8 6 CH_qlo_1686 2 2 0.000516289
Salix brachista GWHAAZH00000014 6 CH_sbr_643 2 2 0.00063014
Selenicereus undatus Scaffold_2055 6 CH_sun_315 2 2 0.000435983
Tripterygium wilfordii NC_052249.1 6 CH_twi_519 2 2 0.00083626
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_772 2 2 0.000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001