Functional clusters

Information

  • Type InterPro
  • Description Translation initiation factor 3

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC01 5 CH_bca_1881 2 2 0.00059854
Brassica napus C03 5 CH_bna_601 3 5 0.00000113681
Capsicum annuum PGAv.1.6.scaffold588 5 CH_can_676 2 2 0.000247831
Hydrangea macrophylla Hma1.2p1_0028F.1 5 CH_hma_683 2 3 0.000999685
Lonicera japonica GWHAAZE00000005 5 CH_lonja_723 2 2 0.0000598874
Nelumbo nucifera chr8 5 CH_nnu_495 2 2 0.00028901
Sequoiadendron giganteum chr9 5 CH_sgi_2415 2 2 0.000487151
Sequoiadendron giganteum chr2 5 CH_sgi_2416 2 2 0.000487151
Brassica carinata ChrC01 6 CH_bca_1881 2 2 0.00059854
Brassica napus C03 6 CH_bna_601 3 5 0.00000113681
Capsicum annuum PGAv.1.6.scaffold588 6 CH_can_676 2 2 0.000247831
Fragaria x ananassa Fvb1-3 6 CH_fan_940 3 34 0.000257747
Hydrangea macrophylla Hma1.2p1_0028F.1 6 CH_hma_683 2 3 0.000999685
Lonicera japonica GWHAAZE00000005 6 CH_lonja_723 2 2 0.0000598874
Nelumbo nucifera chr8 6 CH_nnu_495 2 2 0.00028901
Sequoiadendron giganteum chr9 6 CH_sgi_2415 2 2 0.000487151
Sequoiadendron giganteum chr2 6 CH_sgi_2416 2 2 0.000487151

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001