Functional clusters

Information

  • Type InterPro
  • Description Arginine-tRNA ligase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cardamine hirsuta Chr8 5 CH_chi_282 3 3 0.000000250835
Carya illinoinensis Chr03 5 CH_cil_655 2 2 0.000185948
Carica papaya supercontig_78 5 CH_cpa_444 2 3 0.000285185
Capsella rubella scaffold_2 5 CH_cru_585 2 2 0.000438693
Daucus carota DCARv2_Chr7 5 CH_dca_405 2 2 0.0000637775
Erigeron canadensis Conyza_canadensis_scaffold:2 5 CH_eca_716 2 3 0.000403835
Glycine max Gm10 5 CH_gma_798 2 2 0.000379557
Lotus japonicus chr2 5 CH_lja_509 2 4 0.000429016
Nelumbo nucifera chr6 5 CH_nnu_149 3 3 0.0000000139215
Phaseolus vulgaris Chr04 5 CH_pvu_509 2 3 0.00022041
Rosa chinensis RcHm_v2.0_Chr7 5 CH_rch_1389 2 2 0.000597979
Rosa chinensis RcHm_v2.0_Chr3 5 CH_rch_1390 2 2 0.000597979
Sequoiadendron giganteum chr10 5 CH_sgi_1418 3 23 0.00000630139
Trochodendron aralioides group3 5 CH_tar_389 4 57 0.00000383099
Tripterygium wilfordii NC_052240.1 5 CH_twi_339 2 2 0.0000557507
Vigna mungo CM024077.1 5 CH_vmu_321 2 2 0.0000646141
Cardamine hirsuta Chr8 6 CH_chi_282 3 3 0.000000250835
Carya illinoinensis Chr03 6 CH_cil_655 2 2 0.000185948
Carica papaya supercontig_78 6 CH_cpa_444 2 3 0.000285185
Capsella rubella scaffold_2 6 CH_cru_585 2 2 0.000438693
Daucus carota DCARv2_Chr7 6 CH_dca_405 2 2 0.0000637775
Erigeron canadensis Conyza_canadensis_scaffold:2 6 CH_eca_716 2 3 0.000403835
Glycine max Gm10 6 CH_gma_798 2 2 0.000379557
Lotus japonicus chr2 6 CH_lja_509 2 4 0.000429016
Nelumbo nucifera chr6 6 CH_nnu_149 3 3 0.0000000139215
Phaseolus vulgaris Chr04 6 CH_pvu_509 2 3 0.00022041
Rosa chinensis RcHm_v2.0_Chr7 6 CH_rch_1389 2 2 0.000597979
Rosa chinensis RcHm_v2.0_Chr3 6 CH_rch_1390 2 2 0.000597979
Sequoiadendron giganteum chr10 6 CH_sgi_1418 3 23 0.00000630139
Trochodendron aralioides group3 6 CH_tar_389 4 57 0.00000383099
Tripterygium wilfordii NC_052240.1 6 CH_twi_339 2 2 0.0000557507
Vigna mungo CM024077.1 6 CH_vmu_321 2 2 0.0000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001