Functional clusters

Information

  • Type InterPro
  • Description Phosphoenolpyruvate carboxykinase, ATP-utilising

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group28 5 CH_ach_512 2 2 0.000543213
Brassica carinata ChrC03 5 CH_bca_1563 2 2 0.000213764
Brassica napus A06 5 CH_bna_1421 2 2 0.00066822
Chara braunii BFEA01000023 5 CH_cbr_145 3 4 0.0000210998
Ceratophyllum demersum 5 5 CH_cde_499 2 2 0.000789796
Glycine max Gm08 5 CH_gma_937 2 2 0.00079707
Lupinus albus Lalb_Chr05 5 CH_lal_757 2 2 0.000787236
Magnolia biondii Chr16 5 CH_mbi_1020 2 2 0.000291397
Olea europaea chr22 5 CH_oeu_311 2 2 0.0000533789
Prunus persica Pp06 5 CH_ppe_755 2 2 0.000447577
Rosa chinensis RcHm_v2.0_Chr5 5 CH_rch_556 3 3 0.0000000834367
Sequoiadendron giganteum chr2 5 CH_sgi_571 4 4 0.0000000000121398
Solanum pennellii Spenn-ch12 5 CH_spe_237 3 3 0.0000000296764
Solanum tuberosum ST4.03ch12 5 CH_stu_777 2 2 0.000307472
Trifolium pratense Tp57577_TGAC_v2_LG2 5 CH_tpr_591 2 2 0.000227092
Actinidia chinensis Lachesis_group28 6 CH_ach_512 2 2 0.000543213
Brassica carinata ChrC03 6 CH_bca_1563 2 2 0.000213764
Brassica napus A06 6 CH_bna_1421 2 2 0.00066822
Chara braunii BFEA01000023 6 CH_cbr_145 3 4 0.0000210998
Ceratophyllum demersum 5 6 CH_cde_499 2 2 0.000789796
Fragaria x ananassa Fvb1-3 6 CH_fan_178 4 4 0.000000000284148
Glycine max Gm08 6 CH_gma_937 2 2 0.00079707
Lupinus albus Lalb_Chr05 6 CH_lal_757 2 2 0.000787236
Magnolia biondii Chr16 6 CH_mbi_1020 2 2 0.000291397
Olea europaea chr22 6 CH_oeu_311 2 2 0.0000533789
Prunus persica Pp06 6 CH_ppe_755 2 2 0.000447577
Rosa chinensis RcHm_v2.0_Chr5 6 CH_rch_556 3 3 0.0000000834367
Sequoiadendron giganteum chr2 6 CH_sgi_571 4 4 0.0000000000121398
Solanum pennellii Spenn-ch12 6 CH_spe_237 3 3 0.0000000296764
Solanum tuberosum ST4.03ch12 6 CH_stu_777 2 2 0.000307472
Trifolium pratense Tp57577_TGAC_v2_LG2 6 CH_tpr_591 2 2 0.000227092

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001