Functional clusters

Information

  • Type InterPro
  • Description Phospholipase A2

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_7 5 CH_aly_593 2 2 0.000396027
Aquilegia oxysepala CHR07 5 CH_aox_527 2 3 0.000721742
Arabidopsis thaliana Chr4 5 CH_ath_462 2 2 0.000171895
Brassica carinata ChrC04 5 CH_bca_1781 2 2 0.000448905
Brassica napus C01 5 CH_bna_440 3 3 0.0000000852732
Cardamine hirsuta Chr3 5 CH_chi_697 2 2 0.000414723
Carya illinoinensis Chr06 5 CH_cil_349 3 4 0.000000230502
Capsella rubella scaffold_7 5 CH_cru_584 2 2 0.000438693
Lotus japonicus chr2 5 CH_lja_438 3 31 0.000137671
Medicago truncatula chr6 5 CH_mtr_304 4 6 0.000000000046814
Nelumbo nucifera chr8 5 CH_nnu_442 2 2 0.000144505
Striga asiatica scaffold21 5 CH_sas_224 2 5 0.000625313
Sechium edule LG12 5 CH_sed_320 2 2 0.0000713419
Sequoiadendron giganteum chr1 5 CH_sgi_343 5 6 0.00000000000000532259
Vaccinium macrocarpon scaffold00274_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_197 3 3 0.000000129529
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 5 CH_vma_781 2 2 0.000929238
Arabidopsis lyrata scaffold_7 6 CH_aly_593 2 2 0.000396027
Aquilegia oxysepala CHR07 6 CH_aox_527 2 3 0.000721742
Arabidopsis thaliana Chr4 6 CH_ath_462 2 2 0.000171895
Brassica carinata ChrC04 6 CH_bca_1781 2 2 0.000448905
Brassica napus C01 6 CH_bna_440 3 3 0.0000000852732
Cardamine hirsuta Chr3 6 CH_chi_697 2 2 0.000414723
Carya illinoinensis Chr06 6 CH_cil_349 3 4 0.000000230502
Capsella rubella scaffold_7 6 CH_cru_584 2 2 0.000438693
Lotus japonicus chr2 6 CH_lja_438 3 31 0.000137671
Medicago truncatula chr6 6 CH_mtr_304 4 6 0.000000000046814
Nelumbo nucifera chr8 6 CH_nnu_442 2 2 0.000144505
Striga asiatica scaffold21 6 CH_sas_224 2 5 0.000625313
Sechium edule LG12 6 CH_sed_320 2 2 0.0000713419
Sequoiadendron giganteum chr1 6 CH_sgi_343 5 6 0.00000000000000532259
Vaccinium macrocarpon scaffold00274_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_197 3 3 0.000000129529
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 6 CH_vma_781 2 2 0.000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001