Functional clusters

Information

  • Type InterPro
  • Description Ribosomal protein L10e

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_11 5 CH_amhyb_371 2 2 0.000505051
Beta vulgaris Chr7_EL10_PGA_scaffold5 5 CH_bvu_339 2 2 0.0000827917
Corylus avellana 2 5 CH_cav_354 3 8 0.00000493552
Fragaria vesca Fvb5 5 CH_fve_556 3 20 0.0000592714
Lonicera japonica GWHAAZE00000001 5 CH_lonja_1038 2 2 0.000359324
Populus trichocarpa Chr13 5 CH_ptr_720 2 3 0.000520176
Solanum lycopersicum SL4.0ch06 5 CH_sly_851 2 3 0.000528221
Solanum pennellii Spenn-ch06 5 CH_spe_761 2 3 0.000400297
Solanum tuberosum ST4.03ch06 5 CH_stu_954 2 4 0.000922336
Amaranthus hybridus AmaHy_arrow1_Scaffold_11 6 CH_amhyb_371 2 2 0.000505051
Beta vulgaris Chr7_EL10_PGA_scaffold5 6 CH_bvu_339 2 2 0.0000827917
Corylus avellana 2 6 CH_cav_354 3 8 0.00000493552
Fragaria x ananassa Fvb7-1 6 CH_fan_1156 2 2 0.00066613
Fragaria vesca Fvb5 6 CH_fve_556 3 20 0.0000592714
Lonicera japonica GWHAAZE00000001 6 CH_lonja_1038 2 2 0.000359324
Populus trichocarpa Chr13 6 CH_ptr_720 2 3 0.000520176
Solanum lycopersicum SL4.0ch06 6 CH_sly_851 2 3 0.000528221
Solanum pennellii Spenn-ch06 6 CH_spe_761 2 3 0.000400297
Solanum tuberosum ST4.03ch06 6 CH_stu_954 2 4 0.000922336

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001