Functional clusters
Information
- Type InterPro
- Description Ergosterol biosynthesis ERG4/ERG24
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Actinidia chinensis | Lachesis_group21 | 5 | CH_ach_441 | 2 | 2 | 0.000325928 |
Brassica carinata | ChrC05 | 5 | CH_bca_1780 | 2 | 2 | 0.000448905 |
Chara braunii | BFEA01000256 | 5 | CH_cbr_313 | 2 | 3 | 0.000647303 |
Coffea canephora | chr6 | 5 | CH_ccan_357 | 2 | 4 | 0.00003833 |
Corchorus olitorius | AWUE01020828.1 | 5 | CH_col_102 | 3 | 6 | 0.0000255722 |
Davidia involucrata | GWHABJS00000015 | 5 | CH_din_729 | 2 | 2 | 0.000500125 |
Gossypium raimondii | Chr02 | 5 | CH_gra_595 | 2 | 3 | 0.000482475 |
Hydrangea macrophylla | Hma1.2p1_0517F.1 | 5 | CH_hma_309 | 2 | 2 | 0.000111086 |
Medicago truncatula | chr4 | 5 | CH_mtr_1157 | 2 | 2 | 0.000246518 |
Populus trichocarpa | Chr10 | 5 | CH_ptr_672 | 2 | 2 | 0.000346801 |
Quercus lobata | 7 | 5 | CH_qlo_1570 | 2 | 2 | 0.000309773 |
Sequoiadendron giganteum | chr7 | 5 | CH_sgi_2545 | 2 | 2 | 0.000730727 |
Sequoiadendron giganteum | chr5 | 5 | CH_sgi_597 | 4 | 5 | 0.0000000000260123 |
Solanum pennellii | Spenn-ch06 | 5 | CH_spe_712 | 2 | 2 | 0.000266874 |
Vanilla planifolia | CM028150.1 | 5 | CH_vpl_608 | 2 | 2 | 0.000443328 |
Actinidia chinensis | Lachesis_group21 | 6 | CH_ach_441 | 2 | 2 | 0.000325928 |
Brassica carinata | ChrC05 | 6 | CH_bca_1780 | 2 | 2 | 0.000448905 |
Chara braunii | BFEA01000256 | 6 | CH_cbr_313 | 2 | 3 | 0.000647303 |
Coffea canephora | chr6 | 6 | CH_ccan_357 | 2 | 4 | 0.00003833 |
Corchorus olitorius | AWUE01020828.1 | 6 | CH_col_102 | 3 | 6 | 0.0000255722 |
Davidia involucrata | GWHABJS00000015 | 6 | CH_din_729 | 2 | 2 | 0.000500125 |
Gossypium raimondii | Chr02 | 6 | CH_gra_595 | 2 | 3 | 0.000482475 |
Hydrangea macrophylla | Hma1.2p1_0517F.1 | 6 | CH_hma_309 | 2 | 2 | 0.000111086 |
Medicago truncatula | chr4 | 6 | CH_mtr_1157 | 2 | 2 | 0.000246518 |
Populus trichocarpa | Chr10 | 6 | CH_ptr_672 | 2 | 2 | 0.000346801 |
Quercus lobata | 7 | 6 | CH_qlo_1570 | 2 | 2 | 0.000309773 |
Sequoiadendron giganteum | chr7 | 6 | CH_sgi_2545 | 2 | 2 | 0.000730727 |
Sequoiadendron giganteum | chr5 | 6 | CH_sgi_597 | 4 | 5 | 0.0000000000260123 |
Solanum pennellii | Spenn-ch06 | 6 | CH_spe_712 | 2 | 2 | 0.000266874 |
Vanilla planifolia | CM028150.1 | 6 | CH_vpl_608 | 2 | 2 | 0.000443328 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |