Functional clusters
Information
- Type InterPro
- Description Band 7 domain
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr8 | 5 | CH_acertr_358 | 3 | 3 | 0.0000008946 |
| Beta vulgaris | Chr2_EL10_PGA_scaffold6 | 5 | CH_bvu_182 | 4 | 8 | 0.000000162428 |
| Erigeron canadensis | Conyza_canadensis_scaffold:8 | 5 | CH_eca_356 | 3 | 3 | 0.00000169139 |
| Eucalyptus grandis | Chr02 | 5 | CH_egr_915 | 3 | 3 | 0.00000497906 |
| Glycine max | Gm02 | 5 | CH_gma_602 | 3 | 6 | 0.0000873937 |
| Malus domestica | Chr09 | 5 | CH_mdo_748 | 3 | 4 | 0.0000132837 |
| Nicotiana tabacum | Nitab4.5_0000269 | 5 | CH_nta_342 | 3 | 9 | 0.000846593 |
| Populus trichocarpa | Chr12 | 5 | CH_ptr_325 | 4 | 9 | 0.000000173451 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 5 | CH_rch_803 | 3 | 3 | 0.0000042219 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 5 | CH_rch_804 | 3 | 3 | 0.0000042219 |
| Sequoiadendron giganteum | chr10 | 5 | CH_sgi_1397 | 3 | 4 | 0.00000407161 |
| Acer truncatum | chr8 | 6 | CH_acertr_358 | 3 | 3 | 0.0000008946 |
| Beta vulgaris | Chr2_EL10_PGA_scaffold6 | 6 | CH_bvu_182 | 4 | 8 | 0.000000162428 |
| Erigeron canadensis | Conyza_canadensis_scaffold:8 | 6 | CH_eca_356 | 3 | 3 | 0.00000169139 |
| Eucalyptus grandis | Chr02 | 6 | CH_egr_915 | 3 | 3 | 0.00000497906 |
| Glycine max | Gm02 | 6 | CH_gma_602 | 3 | 6 | 0.0000873937 |
| Malus domestica | Chr09 | 6 | CH_mdo_748 | 3 | 4 | 0.0000132837 |
| Nicotiana tabacum | Nitab4.5_0000269 | 6 | CH_nta_342 | 3 | 9 | 0.000846593 |
| Populus trichocarpa | Chr12 | 6 | CH_ptr_325 | 4 | 9 | 0.000000173451 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 6 | CH_rch_803 | 3 | 3 | 0.0000042219 |
| Rosa chinensis | RcHm_v2.0_Chr1 | 6 | CH_rch_804 | 3 | 3 | 0.0000042219 |
| Sequoiadendron giganteum | chr10 | 6 | CH_sgi_1397 | 3 | 4 | 0.00000407161 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |